Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00549
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16LL3 Cluster: Putative uncharacterized protein; n=2; ...    46   0.001
UniRef50_Q9VJK9 Cluster: CG4455-PA; n=2; Sophophora|Rep: CG4455-...    44   0.003
UniRef50_Q5CLC8 Cluster: Multi-pass transmembrane protein; n=3; ...    35   1.7  
UniRef50_Q0IHK9 Cluster: LOC443690 protein; n=3; Xenopus laevis|...    33   5.2  
UniRef50_Q0KHU2 Cluster: CG1691-PI, isoform I; n=10; Endopterygo...    33   9.0  
UniRef50_A5K3N2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q16LL3 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 175

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 16/40 (40%), Positives = 28/40 (70%)
 Frame = +2

Query: 257 ISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIM 376
           ISAWGI+ +V+ +++ G G Y+  +CYP  C ++  Y++M
Sbjct: 95  ISAWGIISIVMFVIMIGAGAYWGFICYPLVCKKERNYNMM 134


>UniRef50_Q9VJK9 Cluster: CG4455-PA; n=2; Sophophora|Rep: CG4455-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 126

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 215 PGYTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIM 376
           P  T  E+  +  GIS +GI+ ++  ++V  + FYY  +CYP  C   +KY  M
Sbjct: 43  PPQTAKEYLDSRPGISTFGIIAIIFTVIVLCLVFYYGIICYPLLCRDDKKYRFM 96


>UniRef50_Q5CLC8 Cluster: Multi-pass transmembrane protein; n=3;
           Cryptosporidium|Rep: Multi-pass transmembrane protein -
           Cryptosporidium hominis
          Length = 343

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/77 (27%), Positives = 38/77 (49%)
 Frame = +2

Query: 227 FTEHHKAWCGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIMGTPTMA*PCE 406
           F++    WC +  +GIV   V+L++ G+ F+Y           Q  Y ++   T+A   E
Sbjct: 186 FSQTKGDWC-LYNFGIVCEAVSLIMYGISFFYVESYADVGVGEQYAYWMLTLFTLAGVSE 244

Query: 407 IQDQFSGLT*YFMTFYA 457
           +   F+G   +F+ F+A
Sbjct: 245 LMMLFTGFGSFFILFFA 261


>UniRef50_Q0IHK9 Cluster: LOC443690 protein; n=3; Xenopus
           laevis|Rep: LOC443690 protein - Xenopus laevis (African
           clawed frog)
          Length = 347

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 129 LCVATNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVEY 260
           LCV+     + YG  N G G  + Y  T+P  PS +  +RG++Y
Sbjct: 12  LCVSVRPVRALYGLRNSGTGAYRGY-NTNPAFPSLTYLQRGLQY 54


>UniRef50_Q0KHU2 Cluster: CG1691-PI, isoform I; n=10;
           Endopterygota|Rep: CG1691-PI, isoform I - Drosophila
           melanogaster (Fruit fly)
          Length = 588

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 350 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQI 258
           DKN+  + RN RNP+  +P P  +  FP++I
Sbjct: 67  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRI 97


>UniRef50_A5K3N2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 3063

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 627 C*NIVDLHMHW*FQYRFSQKRFLCLIL*VSALCLTHTNFKCLFVICFNLNTYFNLYVA*N 448
           C  I ++  H  FQY   + +FL LIL +  LCLT    K L V+ F    + +     +
Sbjct: 556 CLKIFEVICHRYFQYFLGEIKFLFLIL-IQHLCLTQPFSKLLIVLNFFFYLFDDTLTLFH 614

Query: 447 VIKYY 433
           + KY+
Sbjct: 615 LYKYF 619


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,000,203
Number of Sequences: 1657284
Number of extensions: 14558394
Number of successful extensions: 33085
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33073
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)