Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00549
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 312 PIPATTSATTKNTI 271
           P+P TTS TT+ T+
Sbjct: 160 PLPPTTSTTTRTTL 173


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +2

Query: 221 YTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYY 322
           YT  +HH     +SA   V    A +     FY+
Sbjct: 70  YTLGQHHHNGAAVSAASSVSAASASMAVAAQFYH 103


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +2

Query: 221 YTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYY 322
           YT  +HH     +SA   V    A +     FY+
Sbjct: 129 YTLGQHHHNGAAVSAASSVSAASASMAVAAQFYH 162


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +2

Query: 221 YTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYY 322
           YT  +HH     +SA   V    A +     FY+
Sbjct: 70  YTLGQHHHNGAAVSAASSVSAASASMAVAAQFYH 103


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +2

Query: 221 YTFTEHHKAWCGISAWGIVFLVVALVVAGMGFYY 322
           YT  +HH     +SA   V    A +     FY+
Sbjct: 129 YTLGQHHHNGAAVSAASSVSAASASMAVAAQFYH 162


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 222 YPGKCLRTV*PSLDPGSHY 166
           +PG   R V P+LD  S+Y
Sbjct: 459 FPGGLGRAVVPTLDATSYY 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,546
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)