Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00549
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ012170-1|AAY68208.1|  139|Homo sapiens PC-3 secreted microprot...    31   4.0  
S71129-1|AAC60618.1|   72|Homo sapiens acetylcholinesterase prot...    30   9.3  
BC024147-1|AAH24147.2|  505|Homo sapiens GPATC8 protein protein.       30   9.3  
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.     30   9.3  
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.     30   9.3  

>DQ012170-1|AAY68208.1|  139|Homo sapiens PC-3 secreted microprotein
           precursor protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 257 ISAWGIVFLVVALVVAGMGFY---YFSMCYPYFCHRQEKYHIMGTPTMA*PC 403
           +  WGI+ LV++L++   G Y   YF    P  CH + KY  +G   +   C
Sbjct: 15  LGGWGIICLVMSLLLQHPGVYSKCYFQAQAP--CHYEGKYFTLGESWLRKDC 64


>S71129-1|AAC60618.1|   72|Homo sapiens acetylcholinesterase
           protein.
          Length = 72

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 262 RYSTPRLVVLCEGIPGEVPPY--GLAFPRPWFPLPYLLFPRLV 140
           R   P L+ L    P   P +  G A PRP  PLP LL  +L+
Sbjct: 20  RQCNPSLLPLASEAPSTCPGFTHGEAAPRPGLPLPLLLLHQLL 62


>BC024147-1|AAH24147.2|  505|Homo sapiens GPATC8 protein protein.
          Length = 505

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 306 PATTSATTKNTIPHADIPHHA 244
           PAT SAT+  T+ HA + HHA
Sbjct: 367 PATASATSITTVQHAILQHHA 387


>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
          Length = 1089

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 306  PATTSATTKNTIPHADIPHHA 244
            PAT SAT+  T+ HA + HHA
Sbjct: 951  PATASATSITTVQHAILQHHA 971


>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
          Length = 1450

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 306  PATTSATTKNTIPHADIPHHA 244
            PAT SAT+  T+ HA + HHA
Sbjct: 1312 PATASATSITTVQHAILQHHA 1332


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,547,657
Number of Sequences: 237096
Number of extensions: 2340512
Number of successful extensions: 4312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4310
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)