Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00548
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 LDKLKAERDVGITIDIALWKFETSKYYVTII 321
           L KLK    +G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 746 IESFNEAFSVSFAFFTL 696
           I++FN+ F  SF  FTL
Sbjct: 271 IDAFNDIFGWSFLLFTL 287


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 LDKLKAERDVGITIDIALWKFETSKYYVTII 321
           L KLK    +G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 746 IESFNEAFSVSFAFFTL 696
           I++FN+ F  SF  FTL
Sbjct: 197 IDAFNDIFGWSFLLFTL 213


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 651 CCLRAIQKWARKRQQLGCSQSS*CMRIL 568
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 651 CCLRAIQKWARKRQQLGCSQSS*CMRIL 568
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 315 GNIVLASFELPESNIDCDTDVTLSL*FVQYPSIFEG 208
           GNI +  + +P  NI+   +V L+   + +  + +G
Sbjct: 151 GNIAMELWNMPRENIEPLPNVILACHMLSFLMVHQG 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,686
Number of Sequences: 336
Number of extensions: 3964
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)