Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00547
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1; ... 130 2e-29
UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1; n... 59 1e-07
UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2... 56 1e-06
UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar... 55 2e-06
UniRef50_A0JGX7 Cluster: Nucleosome assembly protein 2; n=1; Tak... 49 1e-04
UniRef50_A2Y9E3 Cluster: Putative uncharacterized protein; n=2; ... 46 8e-04
UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=... 46 0.001
UniRef50_Q38809 Cluster: Arabidopsis thaliana Col-0 nucleosome a... 44 0.004
UniRef50_Q19007 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_A3BDI3 Cluster: Putative uncharacterized protein; n=4; ... 42 0.010
UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes... 42 0.010
UniRef50_Q4WTN7 Cluster: Nucleosome assembly protein Nap1, putat... 42 0.014
UniRef50_O59797 Cluster: Putative nucleosome assembly protein C3... 40 0.041
UniRef50_UPI0000F34542 Cluster: Nucleosome assembly protein 1-li... 40 0.055
UniRef50_Q7Q1T5 Cluster: ENSANGP00000010373; n=1; Anopheles gamb... 40 0.072
UniRef50_Q17PD1 Cluster: Nucleosome assembly protein; n=1; Aedes... 39 0.096
UniRef50_Q99457 Cluster: Nucleosome assembly protein 1-like 3; n... 39 0.096
UniRef50_Q96NT1 Cluster: Nucleosome assembly protein 1-like 5; n... 39 0.13
UniRef50_UPI0000EB4B18 Cluster: nucleosome assembly protein 1-li... 38 0.17
UniRef50_Q9W1G7 Cluster: CG5330-PA; n=4; Sophophora|Rep: CG5330-... 38 0.22
UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2; n... 38 0.22
UniRef50_Q794H2 Cluster: Nucleosome assembly protein 1-like 3; n... 38 0.29
UniRef50_P25293 Cluster: Nucleosome assembly protein; n=4; Sacch... 37 0.39
UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-li... 35 2.1
UniRef50_A3LZ21 Cluster: Predicted protein; n=1; Pichia stipitis... 34 2.7
UniRef50_P78920 Cluster: Putative nucleosome assembly protein C2... 34 3.6
UniRef50_A4S6E1 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 8.3
UniRef50_Q5KG91 Cluster: Nucleosome assembly protein I, putative... 33 8.3
>UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1;
n=7; Coelomata|Rep: Nucleosome assembly protein isoform
1 - Bombyx mori (Silk moth)
Length = 395
Score = 130 bits (315), Expect = 2e-29
Identities = 65/101 (64%), Positives = 70/101 (69%)
Frame = +3
Query: 369 KTYKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAILRVRKRRMTRLSS 548
K YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAI +++ +
Sbjct: 97 KLYKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIE 156
Query: 549 LQWIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
P + F SEMMQEHDEPILKCLQD
Sbjct: 157 PPMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQD 197
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL
Sbjct: 59 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 98
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/60 (71%), Positives = 43/60 (71%)
Frame = +2
Query: 83 MGTVERSGDDHTXXXXXXXXXXXXXXXXLAQHLLKSGVTRNEMIAAITNRLHAEAMASYP 262
MGTVERSGDDHT LAQHLLKSGVTRNEMIAAITNRLHAEAMAS P
Sbjct: 1 MGTVERSGDDHTSEMESAEEEEVVGSGELAQHLLKSGVTRNEMIAAITNRLHAEAMASLP 60
>UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1;
n=90; Eumetazoa|Rep: Nucleosome assembly protein 1-like
1 - Homo sapiens (Human)
Length = 391
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/99 (36%), Positives = 55/99 (55%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAILRVRKRRMTRLSSLQ 554
Y+PL++KR I+N YEP ++EC W+ D EE+E++ ++ A + K+ + +
Sbjct: 110 YQPLFDKRFEIINAIYEPTEEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEK-EDPK 165
Query: 555 WIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
IP F T S+M+QEHDEPILK L+D
Sbjct: 166 GIP------EFWLTVFKNVDLLSDMVQEHDEPILKHLKD 198
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
LP V+RR+ AL+ LQ + IEAKFY EVH LE KY L
Sbjct: 70 LPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVL 109
>UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2;
Culicidae|Rep: Nucleosome assembly protein NAP-17 -
Aedes aegypti (Yellowfever mosquito)
Length = 395
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
LP NV+ +I AL+ LQK+++ +EAKF+ EV+ALECKY+ L
Sbjct: 48 LPGNVQHKINALKHLQKKYLSLEAKFFEEVYALECKYQAL 87
Score = 35.1 bits (77), Expect = 1.6
Identities = 25/97 (25%), Positives = 45/97 (46%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAILRVRKRRMTRLSSLQ 554
Y+PL ++R ++ G E E W D++++E+ A R+ + S +
Sbjct: 88 YQPLVDRRKAVIAGETELEAGEA--DWEDESDDEKEIDAEVTERFKRMALNYKNQHSKV- 144
Query: 555 WIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCL 665
I + F T +Q ++M+Q HDEP+L+ L
Sbjct: 145 -IKESQGIPAFWLTVFKNTQTMADMIQPHDEPLLEHL 180
>UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar to
human nucleosome assembly protein 1-like 4 (NAP1L4),;
n=5; Euteleostomi|Rep: Testis cDNA, clone: QtsA-17351,
similar to human nucleosome assembly protein 1-like 4
(NAP1L4), - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 217
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEE-LARAVQNAAILRVRKRRMTRLSSL 551
Y+PL++KR + G EP D E + W + EEEE LA ++N ++ ++ +
Sbjct: 99 YQPLFDKRREFITGDVEPTDAE--SEWHSENEEEEKLAGDMKNKVVITEKEAATAEEPNP 156
Query: 552 QWIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
+ IP F T SE++QE+DEPILK LQD
Sbjct: 157 KGIP------EFWFTIFRNVDMLSELVQEYDEPILKHLQD 190
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
LP V+RRI AL+ LQ IEAKFY EVH LE KY L
Sbjct: 59 LPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAAL 98
Score = 40.7 bits (91), Expect = 0.031
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 557 DPNVKGIPDFWYNIFRNVSML 619
+PN KGIP+FW+ IFRNV ML
Sbjct: 153 EPNPKGIPEFWFTIFRNVDML 173
>UniRef50_A0JGX7 Cluster: Nucleosome assembly protein 2; n=1;
Takifugu rubripes|Rep: Nucleosome assembly protein 2 -
Fugu rubripes (Japanese pufferfish) (Takifugu rubripes)
Length = 84
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +1
Query: 247 DGILPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
+ ++P V+RR+ AL+ LQ + +IEAKFY EVH LE KY L
Sbjct: 27 ESMIPKVVKRRVHALKRLQVQCANIEAKFYEEVHELERKYAAL 69
>UniRef50_A2Y9E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 219
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
L PNVR+R+ LR +Q + +IE KF+ E ALE KY+KL
Sbjct: 54 LSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKL 93
>UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=1;
Anisakis simplex|Rep: Putative nucleosome binding
protein - Anisakis simplex (Herring worm)
Length = 321
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKY 366
LP +++RRI+AL+ LQ E + +EAKFY+ VH LE ++
Sbjct: 19 LPKSIKRRIQALKKLQLEGIHVEAKFYARVHQLEKEF 55
Score = 41.1 bits (92), Expect = 0.024
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAILRVRKRRMTRLSSLQ 554
+ L+EKR IV G +EP D+EC P + EEE+ + + +A +
Sbjct: 59 FDALHEKRKEIVTGEHEPTDEECNYPIINGLTEEEVKKMDEASA--------PEPSEGTK 110
Query: 555 WIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
+P F +EM+QEHDEPILK L D
Sbjct: 111 GVP------DFWLNLLKSVDHLAEMIQEHDEPILKHLYD 143
Score = 39.9 bits (89), Expect = 0.055
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 509 TEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSML 619
TE E KK D+A P KG+PDFW N+ ++V L
Sbjct: 90 TEEEVKKMDEASAPEPSEGTKGVPDFWLNLLKSVDHL 126
>UniRef50_Q38809 Cluster: Arabidopsis thaliana Col-0 nucleosome
assembly protein I-like protein; n=27;
Magnoliophyta|Rep: Arabidopsis thaliana Col-0 nucleosome
assembly protein I-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 382
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 241 RSDGI--LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
RSD + L PNVR+R+ ALR +Q + ++EAKF E LE KY+ L
Sbjct: 50 RSDVLENLTPNVRKRVDALRDIQSQHDELEAKFREERAILEAKYQTL 96
>UniRef50_Q19007 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 316
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYE-KLTSLF 387
LP NV++R+ AL+ LQ + + IE+ FY VH LE ++E K S F
Sbjct: 22 LPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTF 66
>UniRef50_A3BDI3 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 428
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
L P+VR+R+ L +Q + ++E KF+ E ALE KY+KL
Sbjct: 180 LAPSVRKRVDVLMEIQSQHDELEVKFFEEKAALEAKYQKL 219
>UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes
aegypti|Rep: Nucleosome assembly protein - Aedes aegypti
(Yellowfever mosquito)
Length = 325
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/48 (37%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +1
Query: 253 ILPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEK-LTSLFMK 393
+LPP++ +I+AL +Q E + EA+F+ VH++E +++K L +L+ K
Sbjct: 59 MLPPSINTKIQALNKIQHELLSKEAEFHKHVHSMEMEFQKTLGALYEK 106
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 357 MQI*KTYKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEE 479
M+ KT LYEKR IV+G+YEP + LNP +T E
Sbjct: 94 MEFQKTLGALYEKRKQIVSGSYEPIRKDLLNPEEYETSPSE 134
>UniRef50_Q4WTN7 Cluster: Nucleosome assembly protein Nap1,
putative; n=19; Dikarya|Rep: Nucleosome assembly protein
Nap1, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 423
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKY-EKLTSLFMK 393
LP VRRR+ L+ +QKE +EA+F EV LE KY K T L+ +
Sbjct: 82 LPAPVRRRVAGLKGIQKEHAKLEAQFQEEVLELEKKYFAKFTPLYQR 128
Score = 41.1 bits (92), Expect = 0.024
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEEL 482
+ PLY++RA IVNG EP DDE + +++ EEEE+
Sbjct: 122 FTPLYQRRATIVNGAAEPTDDE-VQAGKEEEEEEEV 156
>UniRef50_O59797 Cluster: Putative nucleosome assembly protein
C364.06; n=1; Schizosaccharomyces pombe|Rep: Putative
nucleosome assembly protein C364.06 -
Schizosaccharomyces pombe (Fission yeast)
Length = 393
Score = 40.3 bits (90), Expect = 0.041
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 244 SDGI--LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEK 372
S+G+ LP V+RRI LR LQK + D+E++F E+ LE Y K
Sbjct: 65 SEGVSELPEAVQRRISGLRGLQKRYSDLESQFQKELFELEKAYAK 109
>UniRef50_UPI0000F34542 Cluster: Nucleosome assembly protein 1-like
3.; n=2; Eutheria|Rep: Nucleosome assembly protein
1-like 3. - Bos Taurus
Length = 331
Score = 39.9 bits (89), Expect = 0.055
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 378 KPLYEKRALIVNGTYEPNDDECLNPWR-DDTEEEELARAVQNAAILRVRKRRMTRLSSLQ 554
+PLY +R I+N YEP ++EC W +D E + +A A+ + + +LQ
Sbjct: 96 RPLYNRRFQIINAEYEPTEEEC--EWNLEDEEAKTEEKAESKDALEASPEVKEDPKEALQ 153
Query: 555 WIPM*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
++ G T M+Q++DEPIL L D
Sbjct: 154 -------TKAEGLTVFKNVDKLGPMIQKYDEPILNFLSD 185
>UniRef50_Q7Q1T5 Cluster: ENSANGP00000010373; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010373 - Anopheles gambiae
str. PEST
Length = 283
Score = 39.5 bits (88), Expect = 0.072
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYE 369
+PPN++ ++ ALR +Q + V+ E KF+ + H +E +Y+
Sbjct: 10 VPPNIQAKLYALRKIQLDLVEREVKFHLKAHEMEVQYQ 47
>UniRef50_Q17PD1 Cluster: Nucleosome assembly protein; n=1; Aedes
aegypti|Rep: Nucleosome assembly protein - Aedes aegypti
(Yellowfever mosquito)
Length = 323
Score = 39.1 bits (87), Expect = 0.096
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEK 372
+PPN+R +I L+ Q + ++ EA+F+ +VH LE ++K
Sbjct: 40 MPPNMRIKIETLKKAQLDLLEKEAEFHQKVHLLEVDFQK 78
>UniRef50_Q99457 Cluster: Nucleosome assembly protein 1-like 3;
n=10; Eutheria|Rep: Nucleosome assembly protein 1-like 3
- Homo sapiens (Human)
Length = 506
Score = 39.1 bits (87), Expect = 0.096
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 378 KPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQN 500
KPLY++R I+N YEP ++EC W + EE VQ+
Sbjct: 141 KPLYDRRFQIINAEYEPTEEEC--EWNSEDEEFSSDEEVQD 179
>UniRef50_Q96NT1 Cluster: Nucleosome assembly protein 1-like 5;
n=11; Eutheria|Rep: Nucleosome assembly protein 1-like 5
- Homo sapiens (Human)
Length = 182
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 229 SPSCRSDGI--LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
+P ++D I LP +V+ R+ AL+ LQK IEAKF E ALE KY +
Sbjct: 62 APKPKNDFIESLPNSVKCRVLALKKLQKRCDKIEAKFDKEFQALEKKYNDI 112
>UniRef50_UPI0000EB4B18 Cluster: nucleosome assembly protein 1-like
6 (NAP1L6), misc RNA; n=3; Canis lupus familiaris|Rep:
nucleosome assembly protein 1-like 6 (NAP1L6), misc RNA
- Canis familiaris
Length = 303
Score = 38.3 bits (85), Expect = 0.17
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +1
Query: 268 VRRRIRALRTLQKEFVDIEAKFYSEVHALECKY 366
++++++AL+ LQ ++ +EA+FY + H LE KY
Sbjct: 10 IKQQVKALKNLQAQYAQVEAQFYRDFHDLEKKY 42
Score = 33.5 bits (73), Expect = 4.8
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDEC 443
Y+PL++KR+ I+N +EP + EC
Sbjct: 46 YQPLFDKRSEIINAIHEPTEGEC 68
>UniRef50_Q9W1G7 Cluster: CG5330-PA; n=4; Sophophora|Rep: CG5330-PA
- Drosophila melanogaster (Fruit fly)
Length = 370
Score = 37.9 bits (84), Expect = 0.22
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +1
Query: 253 ILPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYE 369
+LP V+ RI L+ LQ + ++IEA+F+ +V+ LE KY+
Sbjct: 48 MLPAPVQNRIVFLKNLQLQHLNIEAQFFEDVYKLEQKYQ 86
Score = 33.5 bits (73), Expect = 4.8
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAILRVRKRRMTRLSSLQ 554
Y+PL++KR I+ G +P +++ W+ E E +A R LSSL+
Sbjct: 89 YQPLFDKRREIIEGKVDPAEEK--PQWK---EPESSTDNEADAEHFR------EALSSLK 137
Query: 555 WIPM-*RVSQTFGTTYSGMSQCFSEMMQEHDEPILKCLQD 671
IP + F T + SEM+Q HDEP ++ L D
Sbjct: 138 SIPKDAKGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLID 177
>UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2;
n=15; Eutheria|Rep: Nucleosome assembly protein 1-like 2
- Homo sapiens (Human)
Length = 460
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 375 YKPLYEKRALIVNGTYEPNDDEC-LNPWRDDTEEEEL 482
Y+PL EKR I+N YEP ++EC +D ++EE+
Sbjct: 144 YQPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEM 180
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKL 375
LP V+ R+ AL+ LQ ++E+KF E H +E K+ ++
Sbjct: 104 LPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEM 143
>UniRef50_Q794H2 Cluster: Nucleosome assembly protein 1-like 3; n=3;
Murinae|Rep: Nucleosome assembly protein 1-like 3 - Mus
musculus (Mouse)
Length = 544
Score = 37.5 bits (83), Expect = 0.29
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 378 KPLYEKRALIVNGTYEPNDDECLNPWRDDTE 470
KPLY+KR I+N YEP ++EC W + E
Sbjct: 152 KPLYDKRFQIINAEYEPTEEEC--EWNSEEE 180
>UniRef50_P25293 Cluster: Nucleosome assembly protein; n=4;
Saccharomycetales|Rep: Nucleosome assembly protein -
Saccharomyces cerevisiae (Baker's yeast)
Length = 417
Score = 37.1 bits (82), Expect = 0.39
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 250 GILPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKY 366
G LP NV+ ++ +L+TLQ E ++E +F E+ LE K+
Sbjct: 86 GGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKF 124
>UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-like
4 (Nucleosome assembly protein 2) (NAP2).; n=3;
Tetrapoda|Rep: Nucleosome assembly protein 1-like 4
(Nucleosome assembly protein 2) (NAP2). - Xenopus
tropicalis
Length = 374
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 569 KGIPDFWYNIFRNVSML 619
KGIPDFW IFRNV M+
Sbjct: 143 KGIPDFWLTIFRNVDMI 159
>UniRef50_A3LZ21 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 416
Score = 34.3 bits (75), Expect = 2.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 598 YVVPKVWDTLYIGIHWRLDSLVILLFLTLSMA 503
YVV + W T+Y+ HWRLD +V +L+ S +
Sbjct: 336 YVVLQWWATIYLDHHWRLDLIVGMLYSIASFS 367
>UniRef50_P78920 Cluster: Putative nucleosome assembly protein
C2D10.11C; n=1; Schizosaccharomyces pombe|Rep: Putative
nucleosome assembly protein C2D10.11C -
Schizosaccharomyces pombe (Fission yeast)
Length = 379
Score = 33.9 bits (74), Expect = 3.6
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEK 372
L P V+ RI AL+ LQK+ I+ +F ++ LE KYEK
Sbjct: 87 LAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYEK 125
>UniRef50_A4S6E1 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 372
Score = 32.7 bits (71), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKLTSLFMKS 396
L P VR R++AL LQ+ + + E ALE KY L + K+
Sbjct: 35 LHPRVRARVKALEKLQEAHDGVHEAYLEEKKALEAKYAALYAPMYKA 81
>UniRef50_Q5KG91 Cluster: Nucleosome assembly protein I, putative;
n=2; Filobasidiella neoformans|Rep: Nucleosome assembly
protein I, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 416
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKY 366
LPP VRRRI L+ +Q + +IE +F + LE K+
Sbjct: 94 LPPAVRRRIDGLKGVQAKHSEIEGEFQLAILELEKKF 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,849,822
Number of Sequences: 1657284
Number of extensions: 12461865
Number of successful extensions: 32876
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 31842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32861
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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