Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00547
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z75712-11|CAB00044.2|  257|Caenorhabditis elegans Hypothetical p...    31   0.99 
Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   3.0  
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    27   9.2  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +1

Query: 256 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYE-KLTSLF 387
           LP NV++R+ AL+ LQ + + IE+ FY  VH LE ++E K  S F
Sbjct: 22  LPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTF 66


>Z75712-11|CAB00044.2|  257|Caenorhabditis elegans Hypothetical
           protein K04G2.7 protein.
          Length = 257

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +1

Query: 265 NVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKLTSLFMK 393
           N  ++ R LRT +KE+ D++ +   E+   + K E+LT+ ++K
Sbjct: 114 NFLKKRRILRTSRKEYADVDLQVNKEIVRRQNKGERLTNPWIK 156


>Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical
           protein T24C2.4 protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
 Frame = +3

Query: 447 NPWRDDTEEEELARAVQNAAILRVRKRRMTRLSS------LQWIPM*RVSQTFGTTYSGM 608
           NP   DTE  +L   ++   I++ RK R+ RLS+      LQ+    ++ +T    ++G 
Sbjct: 140 NPTFRDTELSKLIETLKKVEIVKARKLRLNRLSTKEITAVLQFFEP-QLLETIQIEHAGK 198

Query: 609 SQCFSEMMQ 635
           +  F+E++Q
Sbjct: 199 ADQFNEIVQ 207


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 578 GYPLHWDPLEAR*PCHPSFPHPQYG 504
           GYP  + P       HP +PHP YG
Sbjct: 107 GYPAGYPPYGMPPRHHPGYPHPAYG 131


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 354 ECMYFTVKLGLNVDKLLLKSSQGADSPTNI 265
           EC++ + K GLNVDK+L        +PT I
Sbjct: 188 ECLHISAKSGLNVDKVLEAIIDRVPAPTAI 217


>AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical
           protein T05E7.5 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 214 SGHHKSPSC--RSDGILPPNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYE 369
           + HH+S S   RS+    PN+ +R   +      F   E+K  SE+  L+ K +
Sbjct: 37  NSHHRSLSLFFRSNYSFSPNILKRTETMFAENPFFTPTESKLKSEIALLQMKLD 90


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 599 ICCTKSLGYPLHW 561
           +CC K LGYP +W
Sbjct: 52  LCCEKELGYPSNW 64


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
            protein Y108G3AL.7 protein.
          Length = 1192

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 93   TVPIFNISLSPPSKFSEKKDGDVTSSLLLVP 1
            T P+ +++ +PP K   +K+  VT+ +L VP
Sbjct: 922  TTPVSSMAAAPPKKGRPRKNTTVTTPVLSVP 952


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565,401
Number of Sequences: 27780
Number of extensions: 316608
Number of successful extensions: 930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)