Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00546
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 132 2e-30
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 122 4e-27
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 118 4e-26
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 113 1e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 111 4e-24
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 111 4e-24
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 95 5e-19
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 91 6e-18
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 87 1e-16
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 83 2e-15
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 82 4e-15
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 81 7e-15
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 80 2e-14
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 76 3e-13
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 72 4e-12
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 71 1e-11
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 71 1e-11
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 71 1e-11
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 45 7e-04
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 43 0.002
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 42 0.005
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 40 0.021
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 35 0.78
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 3.1
UniRef50_Q9DTD4 Cluster: ORF1; n=32; Torque teno virus|Rep: ORF1... 32 4.1
UniRef50_Q0CZR5 Cluster: Predicted protein; n=3; Trichocomaceae|... 32 4.1
UniRef50_A5NXM0 Cluster: Selenocysteine-specific translation elo... 32 5.5
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 32 5.5
UniRef50_Q4SNZ3 Cluster: Chromosome 15 SCAF14542, whole genome s... 31 7.2
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 31 7.2
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 9.6
UniRef50_Q1INT3 Cluster: Glutamate carboxypeptidase II; n=1; Aci... 31 9.6
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 132 bits (320), Expect = 2e-30
Identities = 60/73 (82%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 GYPLPKLYAKLHY 73
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 360
VSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 75 VSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 122 bits (293), Expect = 4e-27
Identities = 54/73 (73%), Positives = 61/73 (83%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLY KLHY
Sbjct: 61 AYVLPKLYVKLHY 73
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPP 327
VSCAIHSKVVRNRS++ + RTPP
Sbjct: 75 VSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 118 bits (285), Expect = 4e-26
Identities = 56/93 (60%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 215 MFQLPKLYAKLHY--SC--HAPSTAKLSGTDRR 301
+ LPKLYAK Y SC H+ S T+RR
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRR 93
Score = 42.3 bits (95), Expect = 0.004
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 372
VSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 75 VSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 113 bits (272), Expect = 1e-24
Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 215 MFQLPKLYAKLHY--SC--HAPSTAKLSGTDRR 301
+ LPK Y KLHY SC HA S DR+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRK 93
Score = 39.1 bits (87), Expect = 0.036
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPK 330
VSCAIH+++VR RS++DR+ R PP+
Sbjct: 75 VSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 111 bits (268), Expect = 4e-24
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 211
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 111 bits (268), Expect = 4e-24
Identities = 56/93 (60%), Positives = 66/93 (70%), Gaps = 4/93 (4%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 215 MFQLPKLYAKLHY--SC--HAPSTAKLSGTDRR 301
++LPK Y KL Y SC H S TDRR
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRR 93
Score = 39.9 bits (89), Expect = 0.021
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 372
VSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 75 VSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 95.1 bits (226), Expect = 5e-19
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Frame = +2
Query: 50 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 229
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 230 K--LYAKLHY 253
K LY KL+Y
Sbjct: 61 KLYLYVKLNY 70
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 91.5 bits (217), Expect = 6e-18
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 215 MFQLPKLYAKLHY 253
++LPK Y K +Y
Sbjct: 61 GYELPKTYQKQYY 73
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 87.0 bits (206), Expect = 1e-16
Identities = 48/95 (50%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 215 M--FQLPKLYAKLHY--SC--HAPSTAKLSGTDRR 301
F +PK+Y KL Y SC HA S DRR
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRR 95
Score = 33.9 bits (74), Expect = 1.4
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 366
VSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 77 VSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 83.0 bits (196), Expect = 2e-15
Identities = 35/74 (47%), Positives = 53/74 (71%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 215 MFQLPKLYAKLHYS 256
+ +PKLY K +S
Sbjct: 61 YYTMPKLYYKNTFS 74
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 82.2 bits (194), Expect = 4e-15
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +2
Query: 65 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 244
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 245 LHY 253
LHY
Sbjct: 71 LHY 73
Score = 31.5 bits (68), Expect = 7.2
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTP 324
VSCAIHS+VVRN K RR P
Sbjct: 75 VSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 81.4 bits (192), Expect = 7e-15
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = +2
Query: 35 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 205
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 206 VY-PMFQLPKLYAKLHY 253
VY F +PKLY K +
Sbjct: 61 VYGANFPMPKLYMKQRF 77
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 214 NVPAP*VIR*APLLVSCAIHSKVVRNRSKKDRRIRTPPKSNF 339
N P P + ++CAIHS+ VR R +R+IR K F
Sbjct: 65 NFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 80.2 bits (189), Expect = 2e-14
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 375
VSCAIHSKVVRNRSKKDRRIRTPPK+ FPRDM+RPQ VQR
Sbjct: 42 VSCAIHSKVVRNRSKKDRRIRTPPKNTFPRDMARPQNVQR 81
Score = 51.2 bits (117), Expect = 8e-06
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +2
Query: 164 IVEAAAVRDINDASVYPMFQLPKLYAKLHY--SC--HAPSTAKLSGTDRR-KTEESVLLP 328
+++ +RDIN+ASVY FQLPKLYAKLHY SC H+ S DRR +T P
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 329 R 331
R
Sbjct: 71 R 71
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 75.8 bits (178), Expect = 3e-13
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 215 MFQ--LPKLYAKLHY--SC--HAPSTAKLSGTDRR 301
+ +PKLY KL Y SC H+ DRR
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRR 173
Score = 41.1 bits (92), Expect = 0.009
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSN 336
+SCAIHS+VVR R +DRRIR PP N
Sbjct: 155 ISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 72.1 bits (169), Expect = 4e-12
Identities = 33/90 (36%), Positives = 53/90 (58%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 215 MFQLPKLYAKLHYSCHAPSTAKLSGTDRRK 304
++ PKLY+ + YS + + K R+K
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKK 90
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 86 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYSCHA 265
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++YS A
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 266 PSTAKL 283
+K+
Sbjct: 187 AIHSKV 192
Score = 39.9 bits (89), Expect = 0.021
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPK 330
+S AIHSKVVR RS++ RRIR PPK
Sbjct: 184 ISAAIHSKVVRVRSREARRIRDPPK 208
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 70.5 bits (165), Expect = 1e-11
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 77 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYS 256
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKLALL 93
Query: 257 C-HAP 268
C H+P
Sbjct: 94 CMHSP 98
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 70.5 bits (165), Expect = 1e-11
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +2
Query: 47 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 226
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 227 PKLYAKLHY----SCHAPSTAKLSGTDRRKTEESVLLPRVTS 340
P++ K + +CHA ++ + RK RV S
Sbjct: 62 PRMGYKSQFCVSCACHA-KIVRVRSSQARKIRYGFNPNRVAS 102
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 44.8 bits (101), Expect = 7e-04
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 41 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVYPM 217
+KR+N GR K +G V C NC + +P+ KA++ V + + +++ ++ P
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAIVPR 66
Query: 218 FQLPKLYAKLHYSCHAPSTAKLSGTDRRKTEESVL 322
+ + K Y ++ + + K+ D RK+++ +L
Sbjct: 67 YYITKTYC-VNCAIYL-GIIKVRSEDERKSKKPIL 99
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 43.2 bits (97), Expect = 0.002
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +2
Query: 41 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVR 187
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR 53
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAI 142
M +KR + GR K +G V+C NC R VP DKAI
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAI 36
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 39.9 bits (89), Expect = 0.021
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 211
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++ ++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAII 60
Query: 212 PMFQLPKLY 238
+ + K Y
Sbjct: 61 SRYLVTKTY 69
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 34.7 bits (76), Expect = 0.78
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -2
Query: 211 VYRGIVNISDRRRFYDVPNHELFDSLVFWHAPRAVCASHGFNVTTSMLGASSITALTSH 35
V RG ISD F DV + D LV W+ V S +VT+++L ++ ++L H
Sbjct: 71 VDRGFRQISDSSSFNDVSDSHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 98 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 244
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q9DTD4 Cluster: ORF1; n=32; Torque teno virus|Rep: ORF1 -
Torque teno virus
Length = 825
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 55 WRTRQAWTWSR*SREMHKLRAVRAKRQGYQKVRD*EHRRSGGGQR 189
WR R+ W W R R ++R RA+R ++ R RR G+R
Sbjct: 7 WRRRRPWWWKRRRRRWRRVRPRRARRTVRRRRRRYTVRRRRWGRR 51
>UniRef50_Q0CZR5 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 839
Score = 32.3 bits (70), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 196 VNISDRRRFYDVPNHELFDSLVFWHAPRAVCASHGFNVTTSML 68
V + RR + E+ SL+ H A+C SHG + TTSM+
Sbjct: 445 VEAARERRIPVIHRSEMLASLMRHHKSIAICGSHGKSTTTSMV 487
>UniRef50_A5NXM0 Cluster: Selenocysteine-specific translation
elongation factor; n=1; Methylobacterium sp. 4-46|Rep:
Selenocysteine-specific translation elongation factor -
Methylobacterium sp. 4-46
Length = 650
Score = 31.9 bits (69), Expect = 5.5
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Frame = +2
Query: 2 GTRFTGSEVRNMTRKRRNGGRAKHGRGH--VKAVRCTNCARCVPKDKAIKKFVIRNIVEA 175
G R G+EVR+ R H R H + A + +A+ ++R++V A
Sbjct: 439 GERVLGAEVRDALRSEALAALDAHHRAHPLEHGISHARLATALRTGEAVAAAILRDLVAA 498
Query: 176 A-AVRD---INDASVYPMFQLPKLYAKLHYSCH-----APSTAKLSGTDRRKTE 310
AVRD + A+ P Q P L L S P A+ +G D R+ E
Sbjct: 499 GRAVRDRDLVRAAAFDPQRQEPALVRGLAESFRRAGLTPPDEAEAAGRDPRRRE 552
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 29 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAI 142
RN RK R+G + RG V C C VP+ KAI
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAI 40
>UniRef50_Q4SNZ3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14542, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 549
Score = 31.5 bits (68), Expect = 7.2
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 164 IVEAAAVRDINDASVYPMFQLPKLYAKLH-YSCHAPSTAKLSGTDRRKTEESV---LLPR 331
+ + V+ N +P +L KLYA+L Y C +R +++ + L+ R
Sbjct: 126 LFQKITVQPSNICVWFPQDELKKLYAQLEVYKCKKMLANNPHLHKKRNSKKGLGRSLMKR 185
Query: 332 VTSLG-TCHVHRQCKGSD 382
+T + H+HRQC D
Sbjct: 186 ITEIPENMHIHRQCSRED 203
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 211 VYRGIVNISDRRRFYDVPNHELFDSLVFWHAPRAVCASHGF 89
VY G +SD +R ++V E F +L+ W++ +HG+
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 44 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 148
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_Q1INT3 Cluster: Glutamate carboxypeptidase II; n=1;
Acidobacteria bacterium Ellin345|Rep: Glutamate
carboxypeptidase II - Acidobacteria bacterium (strain
Ellin345)
Length = 725
Score = 31.1 bits (67), Expect = 9.6
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +2
Query: 68 KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPK----- 232
KH ++A+ T P+D+ +V++ EA I + VY F +P+
Sbjct: 60 KHAEQDMRALTATPHLATTPEDRKTADYVLQKFKEAGLQASIEEYKVY--FGIPESVSID 117
Query: 233 LYAKLHYSCHAPSTAKLSGTDRRKTEESVLLP 328
+ A H PS ++ G D K +S +LP
Sbjct: 118 IVAPEGVVLHGPSPERVDGDDGSK--DSRILP 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,029,012
Number of Sequences: 1657284
Number of extensions: 6423331
Number of successful extensions: 17574
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 17092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17563
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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