Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00546
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    26   0.17 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    26   0.17 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   0.90 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   0.90 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   2.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   6.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   6.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 134 KAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYSCHAPSTAKLSG 289
           K++  FVI  + +A  VR++ +  V    Q  +  + LHY   A  T K+SG
Sbjct: 226 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKL-ANFTVKISG 276


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 134 KAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYSCHAPSTAKLSG 289
           K++  FVI  + +A  VR++ +  V    Q  +  + LHY   A  T K+SG
Sbjct: 182 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKL-ANFTVKISG 232


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 104 TNCARCVPKDKAIKKFVIRNI 166
           T+CA+C  K K   K VI+++
Sbjct: 72  TSCAKCTDKQKQGAKTVIQHL 92


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 104 TNCARCVPKDKAIKKFVIRNIVE 172
           T+C++C  K K    F++R +++
Sbjct: 75  TDCSKCSEKQKEGSDFIMRYLID 97


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 104 TNCARCVPKDKAIKKFVIRNIVE 172
           T+CA+C  K KA  + V+ ++++
Sbjct: 68  TDCAKCNEKVKANVRKVLHHLID 90


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 110 CARCVPKDKAIKKFVIRNIVE 172
           CA+C  K K   + VIR++++
Sbjct: 71  CAKCNEKHKEGVRKVIRHLIK 91


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 104 TNCARCVPKDKAIKKFVIRNIVE 172
           T+C++C  + K   + +IR +++
Sbjct: 71  TSCSKCSQRQKDGSRTIIRYLIK 93


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +2

Query: 83  HVKAVRCTNCARCVPKDKAIKKFVIRNIVE 172
           H+     T C++C    K   K ++R++++
Sbjct: 66  HLPDALHTECSKCSETQKNGSKKIMRHLID 95


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 104 TNCARCVPKDK 136
           TNCA+C  K +
Sbjct: 70  TNCAKCTEKQR 80


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 248 HYSCHAP 268
           HY+CH P
Sbjct: 82  HYTCHCP 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,494
Number of Sequences: 336
Number of extensions: 1611
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)