Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00546
(416 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 135 2e-32
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 135 2e-32
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 135 2e-32
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 135 2e-32
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 135 2e-32
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 135 2e-32
AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p pro... 29 3.3
AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-P... 29 3.3
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 28 5.7
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 28 5.7
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 27 10.0
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 27 10.0
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 214
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 215 MFQLPKLYAKLHY 253
+ LPKLYAKLHY
Sbjct: 61 SYVLPKLYAKLHY 73
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +1
Query: 256 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 357
VSCAIHSKVVRNRS++ RRIRTPP +FP+DM+R
Sbjct: 75 VSCAIHSKVVRNRSREARRIRTPPLRSFPKDMAR 108
>AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p
protein.
Length = 463
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 122 RTARSLCISRL*RDHVHAWRVLHYGAYES 36
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-PA
protein.
Length = 463
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 122 RTARSLCISRL*RDHVHAWRVLHYGAYES 36
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 62 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 163
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 62 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 163
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 286 RNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 375
R+RS++DR R P+ PRD R ++ +R
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERSRER 81
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 286 RNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 375
R+RS++DR R P+ PRD R ++ +R
Sbjct: 52 RSRSREDRNRRRSPERQRPRDNVRERSRER 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,847,073
Number of Sequences: 53049
Number of extensions: 310324
Number of successful extensions: 1002
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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