Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00545
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   4.7  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   8.2  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 111 CNLL-LISQLFNGCYYTYKPSSLITLPIKKT 22
           C+ L  IS++   C+Y +  + L +L IKKT
Sbjct: 321 CDTLHAISKVMKECWYQHPAARLSSLRIKKT 351


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 132 PLLRFGNCNLLLISQLFNGCYYTYKPSSL 46
           PLL  G    +++S+L+ G  +  K SSL
Sbjct: 286 PLLTMGFAYSMIVSKLWRGLRHEIKHSSL 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,064
Number of Sequences: 2352
Number of extensions: 13531
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)