BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00544 (797 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 3.6 AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase... 24 6.3 AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase... 24 6.3 AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 24 6.3 AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 24 6.3 AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 23 8.3 AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 23 8.3 >AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein. Length = 2051 Score = 24.6 bits (51), Expect = 3.6 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Frame = +1 Query: 706 STAPSRTCPSACRATNAGP--VSVHGR 780 ++ P TC S C+AT P V VH R Sbjct: 1982 TSRPLPTCASQCKATEKAPKYVDVHCR 2008 >AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase isoform 2 protein. Length = 484 Score = 23.8 bits (49), Expect = 6.3 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = -1 Query: 422 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 339 E R L + ++ SF + H W+ ++FD Sbjct: 289 EYRYLMKGIETADSFNFNPHKWMLVNFD 316 >AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase isoform 1 protein. Length = 515 Score = 23.8 bits (49), Expect = 6.3 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = -1 Query: 422 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 339 E R L + ++ SF + H W+ ++FD Sbjct: 320 EYRYLMKGIETADSFNFNPHKWMLVNFD 347 >AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein protein. Length = 298 Score = 23.8 bits (49), Expect = 6.3 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -2 Query: 523 PSPSSQHRKFLIVLSACHLVWDTYRRNYSTRCTR 422 P PS++ R+ L H+V + N S+ C R Sbjct: 227 PKPSAESRRCFRCLERGHMVRECQGTNRSSLCIR 260 >AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein protein. Length = 455 Score = 23.8 bits (49), Expect = 6.3 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 2/33 (6%) Frame = +3 Query: 681 PVNTDMVTFNCTVA--YMSQCMSCDKCRACVGP 773 PV+ C Y C S KC AC GP Sbjct: 406 PVDRQQACIRCGADGHYAKSCTSEIKCAACNGP 438 >AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein protein. Length = 152 Score = 23.4 bits (48), Expect = 8.3 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 717 VAYMSQC-MSCDKCRACVGPWAPTALG 794 + ++S+ + +K + VG W PT LG Sbjct: 98 ICWLSKAALKANKVKGPVGKWGPTLLG 124 >AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein protein. Length = 152 Score = 23.4 bits (48), Expect = 8.3 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 717 VAYMSQC-MSCDKCRACVGPWAPTALG 794 + ++S+ + +K + VG W PT LG Sbjct: 98 ICWLSKAALKANKVKGPVGKWGPTLLG 124 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 793,996 Number of Sequences: 2352 Number of extensions: 15017 Number of successful extensions: 25 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 83992206 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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