Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00544
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.6  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   6.3  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   6.3  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   6.3  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   6.3  
AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    23   8.3  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    23   8.3  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 706  STAPSRTCPSACRATNAGP--VSVHGR 780
            ++ P  TC S C+AT   P  V VH R
Sbjct: 1982 TSRPLPTCASQCKATEKAPKYVDVHCR 2008


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 422 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 339
           E R L + ++   SF  + H W+ ++FD
Sbjct: 289 EYRYLMKGIETADSFNFNPHKWMLVNFD 316


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 422 ELRQLKQSLQHEQSFKSHLHDWVNMHFD 339
           E R L + ++   SF  + H W+ ++FD
Sbjct: 320 EYRYLMKGIETADSFNFNPHKWMLVNFD 347


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 523 PSPSSQHRKFLIVLSACHLVWDTYRRNYSTRCTR 422
           P PS++ R+    L   H+V +    N S+ C R
Sbjct: 227 PKPSAESRRCFRCLERGHMVRECQGTNRSSLCIR 260


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
 Frame = +3

Query: 681 PVNTDMVTFNCTVA--YMSQCMSCDKCRACVGP 773
           PV+       C     Y   C S  KC AC GP
Sbjct: 406 PVDRQQACIRCGADGHYAKSCTSEIKCAACNGP 438


>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 717 VAYMSQC-MSCDKCRACVGPWAPTALG 794
           + ++S+  +  +K +  VG W PT LG
Sbjct: 98  ICWLSKAALKANKVKGPVGKWGPTLLG 124


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 717 VAYMSQC-MSCDKCRACVGPWAPTALG 794
           + ++S+  +  +K +  VG W PT LG
Sbjct: 98  ICWLSKAALKANKVKGPVGKWGPTLLG 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,996
Number of Sequences: 2352
Number of extensions: 15017
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)