BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00544 (797 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation ho... 41 0.006 AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens ... 41 0.006 AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens ... 41 0.006 AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation pr... 41 0.006 AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation pr... 41 0.006 AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-li... 41 0.006 Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 34 0.68 AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 34 0.68 BC126317-1|AAI26318.1| 374|Homo sapiens zinc finger protein 696... 31 6.4 AK024191-1|BAB14850.1| 374|Homo sapiens protein ( Homo sapiens ... 31 6.4 >BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation homolog 1 (Drosophila) protein. Length = 223 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182 Score = 32.7 bits (71), Expect = 1.6 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = +1 Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360 I+ + +P + +CN+A+CAS VSKC++ + Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42 >AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to Twisted gastrulation. ). Length = 223 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182 Score = 30.3 bits (65), Expect = 8.4 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360 I+ + +P + +CN+A+CAS SKC++ + Sbjct: 13 ILMFLTWLPESLSCNKALCASDESKCLIQE 42 >AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to TWISTED GASTRULATION PROTEIN PRECURSOR. ). Length = 148 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 20 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 78 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 79 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 107 >AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation protein protein. Length = 223 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182 Score = 32.7 bits (71), Expect = 1.6 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = +1 Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360 I+ + +P + +CN+A+CAS VSKC++ + Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42 >AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation protein precursor protein. Length = 223 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182 Score = 32.7 bits (71), Expect = 1.6 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = +1 Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360 I+ + +P + +CN+A+CAS VSKC++ + Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42 >AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-like protein precursor protein. Length = 223 Score = 40.7 bits (91), Expect = 0.006 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +3 Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680 EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153 Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758 V+ + CTV Y CMS +C+ Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182 Score = 32.7 bits (71), Expect = 1.6 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = +1 Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360 I+ + +P + +CN+A+CAS VSKC++ + Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42 >Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. Length = 2663 Score = 33.9 bits (74), Expect = 0.68 Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = -1 Query: 422 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 336 +L+QL++SLQ E+ KS +HD VNM+ DT Sbjct: 933 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 962 >AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein protein. Length = 2585 Score = 33.9 bits (74), Expect = 0.68 Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = -1 Query: 422 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 336 +L+QL++SLQ E+ KS +HD VNM+ DT Sbjct: 913 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 942 >BC126317-1|AAI26318.1| 374|Homo sapiens zinc finger protein 696 protein. Length = 374 Score = 30.7 bits (66), Expect = 6.4 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +2 Query: 542 CSNK*SRCSTTLALYDISSGHRPISLQTCTRETSCLSFTERGTRFGAGEHRH 697 C S+ S L + +G RP + Q C R S SF R GE H Sbjct: 270 CGQAFSQSSNLLQHQRVHTGERPFACQDCGRAFSRSSFLREHRRIHTGEKPH 321 >AK024191-1|BAB14850.1| 374|Homo sapiens protein ( Homo sapiens cDNA FLJ14129 fis, clone MAMMA1002617, weakly similar to ZINC FINGER PROTEIN 135. ). Length = 374 Score = 30.7 bits (66), Expect = 6.4 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +2 Query: 542 CSNK*SRCSTTLALYDISSGHRPISLQTCTRETSCLSFTERGTRFGAGEHRH 697 C S+ S L + +G RP + Q C R S SF R GE H Sbjct: 270 CGQAFSQSSNLLQHQRVHTGERPFACQDCGRAFSRSSFLREHCRIHTGEKPH 321 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 107,590,116 Number of Sequences: 237096 Number of extensions: 2195549 Number of successful extensions: 5827 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5827 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9813323168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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