Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00544
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation ho... 41 0.006
AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens ... 41 0.006
AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens ... 41 0.006
AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation pr... 41 0.006
AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation pr... 41 0.006
AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-li... 41 0.006
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 34 0.68
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 34 0.68
BC126317-1|AAI26318.1| 374|Homo sapiens zinc finger protein 696... 31 6.4
AK024191-1|BAB14850.1| 374|Homo sapiens protein ( Homo sapiens ... 31 6.4
>BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation
homolog 1 (Drosophila) protein.
Length = 223
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42
>AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens
cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to
Twisted gastrulation. ).
Length = 223
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182
Score = 30.3 bits (65), Expect = 8.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360
I+ + +P + +CN+A+CAS SKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDESKCLIQE 42
>AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to
TWISTED GASTRULATION PROTEIN PRECURSOR. ).
Length = 148
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 20 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 78
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 79 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 107
>AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation
protein protein.
Length = 223
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42
>AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation
protein precursor protein.
Length = 223
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42
>AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-like
protein precursor protein.
Length = 223
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +3
Query: 510 ELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP---EKQVVYHLQSVEQDSE 680
EL + +P LF ALT + D Q W +++PV +LS + + E H Q+V S
Sbjct: 95 ELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSN 153
Query: 681 PVNTDMVTFN---CTVAYMSQCMSCDKCR 758
V+ + CTV Y CMS +C+
Sbjct: 154 NVHAPYSSDKEHMCTVVYFDDCMSIHQCK 182
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 271 IVALICVVPIAYACNEAICASVVSKCMLTQ 360
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQE 42
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 33.9 bits (74), Expect = 0.68
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -1
Query: 422 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 336
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 933 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 962
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 33.9 bits (74), Expect = 0.68
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -1
Query: 422 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 336
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 913 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 942
>BC126317-1|AAI26318.1| 374|Homo sapiens zinc finger protein 696
protein.
Length = 374
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 542 CSNK*SRCSTTLALYDISSGHRPISLQTCTRETSCLSFTERGTRFGAGEHRH 697
C S+ S L + +G RP + Q C R S SF R GE H
Sbjct: 270 CGQAFSQSSNLLQHQRVHTGERPFACQDCGRAFSRSSFLREHRRIHTGEKPH 321
>AK024191-1|BAB14850.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ14129 fis, clone MAMMA1002617, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 374
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +2
Query: 542 CSNK*SRCSTTLALYDISSGHRPISLQTCTRETSCLSFTERGTRFGAGEHRH 697
C S+ S L + +G RP + Q C R S SF R GE H
Sbjct: 270 CGQAFSQSSNLLQHQRVHTGERPFACQDCGRAFSRSSFLREHCRIHTGEKPH 321
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,590,116
Number of Sequences: 237096
Number of extensions: 2195549
Number of successful extensions: 5827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5827
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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