Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00544
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122270-1|AAM52782.1|  257|Drosophila melanogaster SD27025p pro...    63   4e-10
AE014298-776|AAF46063.1|  257|Drosophila melanogaster CG12410-PA...    63   4e-10
AB210899-1|BAD95485.1|  257|Drosophila melanogaster crossveinles...    63   4e-10
U09808-1|AAC24234.1|  249|Drosophila melanogaster tsg protein.         43   4e-04
AE014298-1731|AAF48123.1|  249|Drosophila melanogaster CG1502-PA...    43   4e-04
AE014296-816|AAF47878.1|  116|Drosophila melanogaster CG11582-PA...    31   1.8  
BT022461-1|AAY54877.1|  108|Drosophila melanogaster IP05928p pro...    29   7.4  
BT022438-1|AAY54854.1|  108|Drosophila melanogaster IP05728p pro...    29   7.4  
BT022417-1|AAY54833.1|   94|Drosophila melanogaster IP05628p pro...    29   7.4  
X59772-1|CAB36921.1|  850|Drosophila melanogaster ovo protein pr...    29   9.7  
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro...    29   9.7  
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein...    29   9.7  

>AY122270-1|AAM52782.1|  257|Drosophila melanogaster SD27025p
           protein.
          Length = 257

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 29/80 (36%), Positives = 41/80 (51%)
 Frame = +1

Query: 268 LIVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 447
           +++A++C      +CNE +CAS+VSKCMLTQ                             
Sbjct: 13  VLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELKNCSCCKECLKCLGKNYEECCSC 72

Query: 448 VDMCPKPNDTQTELSKTSYV 507
           V++CPKPNDT+  LSK S+V
Sbjct: 73  VELCPKPNDTRNSLSKKSHV 92



 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +3

Query: 519 DGVPGLFAALTSDPDAQQ---RWLSMTYPVDIDLSAYRPVPEKQVVYHLQSVEQDSEPV- 686
           DGVP LF A+ +  +       W   T+ VD D     P  EK   Y L++ +++ +   
Sbjct: 96  DGVPELFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKNLDEAI 155

Query: 687 --NTDMVTFNCTVAYMSQCMSCDKCR 758
               ++VT NCTV Y+ QC+S +KCR
Sbjct: 156 QERDNIVTVNCTVIYLDQCVSWNKCR 181


>AE014298-776|AAF46063.1|  257|Drosophila melanogaster CG12410-PA
           protein.
          Length = 257

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 29/80 (36%), Positives = 41/80 (51%)
 Frame = +1

Query: 268 LIVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 447
           +++A++C      +CNE +CAS+VSKCMLTQ                             
Sbjct: 13  VLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELKNCSCCKECLKCLGKNYEECCSC 72

Query: 448 VDMCPKPNDTQTELSKTSYV 507
           V++CPKPNDT+  LSK S+V
Sbjct: 73  VELCPKPNDTRNSLSKKSHV 92



 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +3

Query: 519 DGVPGLFAALTSDPDAQQ---RWLSMTYPVDIDLSAYRPVPEKQVVYHLQSVEQDSEPV- 686
           DGVP LF A+ +  +       W   T+ VD D     P  EK   Y L++ +++ +   
Sbjct: 96  DGVPELFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKNLDEAI 155

Query: 687 --NTDMVTFNCTVAYMSQCMSCDKCR 758
               ++VT NCTV Y+ QC+S +KCR
Sbjct: 156 QERDNIVTVNCTVIYLDQCVSWNKCR 181


>AB210899-1|BAD95485.1|  257|Drosophila melanogaster crossveinless
           protein.
          Length = 257

 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 29/80 (36%), Positives = 41/80 (51%)
 Frame = +1

Query: 268 LIVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 447
           +++A++C      +CNE +CAS+VSKCMLTQ                             
Sbjct: 13  VLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELKNCSCCKECLKCLGKNYEECCSC 72

Query: 448 VDMCPKPNDTQTELSKTSYV 507
           V++CPKPNDT+  LSK S+V
Sbjct: 73  VELCPKPNDTRNSLSKKSHV 92



 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +3

Query: 519 DGVPGLFAALTSDPDAQQ---RWLSMTYPVDIDLSAYRPVPEKQVVYHLQSVEQDSEPV- 686
           DGVP LF A+ +  +       W   T+ VD D     P  EK   Y L++ +++ +   
Sbjct: 96  DGVPELFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKNLDEAI 155

Query: 687 --NTDMVTFNCTVAYMSQCMSCDKCR 758
               ++VT NCTV Y+ QC+S +KCR
Sbjct: 156 QERDNIVTVNCTVIYLDQCVSWNKCR 181


>U09808-1|AAC24234.1|  249|Drosophila melanogaster tsg protein.
          Length = 249

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 310 CNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMCPKPNDTQTEL 489
           CNE +C SVVSKC++TQ                             +DMCPK  D    L
Sbjct: 26  CNEVVCGSVVSKCLITQSCQCKLNDCHCCKDCLNCLGELYIECCGCLDMCPKHKDVLPSL 85

Query: 490 SKTSYVGSL 516
           +  S +G +
Sbjct: 86  TPRSEIGDI 94


>AE014298-1731|AAF48123.1|  249|Drosophila melanogaster CG1502-PA
           protein.
          Length = 249

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 21/69 (30%), Positives = 28/69 (40%)
 Frame = +1

Query: 310 CNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMCPKPNDTQTEL 489
           CNE +C SVVSKC++TQ                             +DMCPK  D    L
Sbjct: 26  CNEVVCGSVVSKCLITQSCQCKLNDCHCCKDCLNCLGELYIECCGCLDMCPKHKDVLPSL 85

Query: 490 SKTSYVGSL 516
           +  S +G +
Sbjct: 86  TPRSEIGDI 94


>AE014296-816|AAF47878.1|  116|Drosophila melanogaster CG11582-PA
           protein.
          Length = 116

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 708 NCTVAYMSQCMSCDKCR 758
           NCTV Y+ QC S +KCR
Sbjct: 51  NCTVLYLDQCTSWNKCR 67


>BT022461-1|AAY54877.1|  108|Drosophila melanogaster IP05928p
           protein.
          Length = 108

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 602 VHWICHREPALLSIWITC*SSKEA 531
           +HW+ H +  LL IW+ C  S +A
Sbjct: 6   MHWLAHFQIILLCIWLMCPPSSQA 29


>BT022438-1|AAY54854.1|  108|Drosophila melanogaster IP05728p
           protein.
          Length = 108

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 602 VHWICHREPALLSIWITC*SSKEA 531
           +HW+ H +  LL IW+ C  S +A
Sbjct: 6   MHWLAHFQIILLCIWLMCPPSSQA 29


>BT022417-1|AAY54833.1|   94|Drosophila melanogaster IP05628p
           protein.
          Length = 94

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 602 VHWICHREPALLSIWITC*SSKEA 531
           +HW+ H +  LL IW+ C  S +A
Sbjct: 6   MHWLAHFQIILLCIWLMCPPSSQA 29


>X59772-1|CAB36921.1|  850|Drosophila melanogaster ovo protein
           protein.
          Length = 850

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 458 HISTQLQHSLYKELRQLKQSLQHEQSFKSHLH 363
           H +   QH++Y + +Q +Q   H+Q    H H
Sbjct: 433 HAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFH 464


>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
           protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 458 HISTQLQHSLYKELRQLKQSLQHEQSFKSHLH 363
           H +   QH++Y + +Q +Q   H+Q    H H
Sbjct: 433 HAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFH 464


>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
           protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 458 HISTQLQHSLYKELRQLKQSLQHEQSFKSHLH 363
           H +   QH++Y + +Q +Q   H+Q    H H
Sbjct: 805 HAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFH 836


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,702,043
Number of Sequences: 53049
Number of extensions: 672810
Number of successful extensions: 1859
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)