Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00543
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    29   4.1  
09_02_0147 - 4968360-4969151,4969959-4970369,4970856-4970921,497...    28   9.5  

>06_03_0867 +
           25534760-25539620,25540662-25540857,25540957-25541104,
           25541673-25541751,25542151-25542238,25542330-25542600,
           25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 665 TGKKHAGKSIVTIPTNPIDTTNALISLH*HTGMHAKLKQHP 543
           +G  H GK  V  P NP+D +NA + +     +     +HP
Sbjct: 533 SGSAHPGKEEVLSPKNPVDNSNASLVVEPIEVLEKSGTEHP 573


>09_02_0147 -
           4968360-4969151,4969959-4970369,4970856-4970921,
           4972164-4972233,4972311-4972369
          Length = 465

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 344 FIICLINGAKFPRSVHSTLWRVSGFSRS 427
           F  C++ G K P +  +  WR+SG+S S
Sbjct: 155 FDSCILQGWKDPIAALTAAWRISGWSES 182


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,693,004
Number of Sequences: 37544
Number of extensions: 364700
Number of successful extensions: 466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)