Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00542
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   4.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.4  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 525 TG*RTYRCQYC 557
           TG R YRC++C
Sbjct: 33  TGERPYRCEHC 43


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +1

Query: 688 EDEDVVLFKNFEEKRVKYEDEESL 759
           +D+  V +K  +++ + Y+DEES+
Sbjct: 311 DDQQKVPYKYKDDQWIGYDDEESV 334


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 525 TG*RTYRCQYC 557
           TG R YRC++C
Sbjct: 186 TGERPYRCEHC 196


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 117 LKHALRYYRHLFASLL 70
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 518 LLNRLKNLSMPILLLYLV 571
           LLN+ KNL  P+L   ++
Sbjct: 113 LLNKSKNLQFPLLSTLII 130


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 518 LLNRLKNLSMPILLLYLV 571
           LLN+ KNL  P+L   ++
Sbjct: 113 LLNKSKNLQFPLLSTLII 130


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 117 LKHALRYYRHLFASLL 70
           L+  LRY+  +F+SLL
Sbjct: 84  LQQKLRYFEEVFSSLL 99


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 518 LLNRLKNLSMPILLLYLV 571
           LLN+ KNL  P+L   ++
Sbjct: 113 LLNKSKNLQFPLLSTLII 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,800
Number of Sequences: 336
Number of extensions: 3062
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)