BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00542 (785 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 90 3e-19 SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 75 9e-15 SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 55 1e-08 SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 51 2e-07 SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 5e-06 SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 42 8e-05 SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 42 1e-04 SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.009 SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 28 1.3 SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 27 3.0 SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 27 4.0 SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 5.3 SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 7.0 SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 25 9.3 SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 9.3 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 90.2 bits (214), Expect = 3e-19 Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 1/82 (1%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436 WCGHCK+LAPEY AA +L E+ I L +VD T+E DL Y +RGYPTL F+NG I Sbjct: 50 WCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQI 107 Query: 437 -DYSGGRQADDIISWLKKKTGP 499 YSG R+ D ++ +++K+ P Sbjct: 108 SQYSGPRKHDALVKYMRKQLLP 129 Score = 66.1 bits (154), Expect = 5e-12 Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 3/80 (3%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG--- 427 WCGHCK+LAP Y K A + + ++S + +AK+DAT E D+ S + G+PT+ FF+ Sbjct: 384 WCGHCKNLAPTYEKLAEEYS-DDSNVVVAKIDAT-ENDI--SVSISGFPTIMFFKANDKV 439 Query: 428 SPIDYSGGRQADDIISWLKK 487 +P+ Y G R +D+ +++ K Sbjct: 440 NPVRYEGDRTLEDLSAFIDK 459 Score = 27.1 bits (57), Expect = 3.0 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%) Frame = +3 Query: 168 TEENVLVLSKANFETVI-STTEYILVEFYA 254 ++E+++VL NF+ ++ T+ +LVEFYA Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYA 382 >SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 359 Score = 75.4 bits (177), Expect = 9e-15 Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%) Frame = +2 Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS 430 +WCGHCKSLAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F +GS Sbjct: 49 TWCGHCKSLAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGS 107 Query: 431 -PIDYSGGRQADDIISWLKKKTG 496 P+ YS R D + ++ +KTG Sbjct: 108 EPVQYSNARDVDSLTQFVSEKTG 130 Score = 59.7 bits (138), Expect = 5e-10 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNG 427 WCG+CK LAP Y + K+ + E +++ K++A D+ + V +PT+KFF Sbjct: 169 WCGYCKRLAPTY-ETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKD 227 Query: 428 SPIDYSGGRQADDIISWLKKKTG 496 P Y G R + +I ++ KK+G Sbjct: 228 KPELYEGDRSLESLIEYINKKSG 250 >SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosaccharomyces pombe|chr 2|||Manual Length = 290 Score = 54.8 bits (126), Expect = 1e-08 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436 WCG CK+++P +++ A+K A + AKV+ +++ +A GV+ PT FF NG I Sbjct: 30 WCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQI 87 Query: 437 DYSGG 451 D G Sbjct: 88 DMLTG 92 >SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 50.8 bits (116), Expect = 2e-07 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNG 427 WCG+CK L P Y K A+ L P+ DA Q + + Y V+G+PT+K G Sbjct: 59 WCGYCKKLVPTYQKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKG 117 Query: 428 SPI---DYSGGR 454 S + DY+G R Sbjct: 118 SSLSSTDYNGDR 129 >SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccharomyces pombe|chr 2|||Manual Length = 121 Score = 46.4 bits (105), Expect = 5e-06 Identities = 26/77 (33%), Positives = 35/77 (45%) Frame = +2 Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436 WCG CK L P KL+E+ V+A + D+A+ GV PT+ FR G + Sbjct: 46 WCGPCKYLKP----FLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQEL 101 Query: 437 DYSGGRQADDIISWLKK 487 D G + S L K Sbjct: 102 DRIVGADVKTLSSLLAK 118 >SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 103 Score = 42.3 bits (95), Expect = 8e-05 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +2 Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433 +WCG CK++AP++ + + S KVD Q ++A GV P+ ++NG Sbjct: 28 TWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEK 83 Query: 434 ID 439 I+ Sbjct: 84 IE 85 >SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 632 Score = 41.9 bits (94), Expect = 1e-04 Identities = 22/111 (19%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Frame = +2 Query: 266 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 445 HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+ Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267 Query: 446 GGRQADDIISWLKKKTGPPAVRLPL--LNRLKNLSMPILLLYLVSFRTRAQ 592 G + ++S+ + A+++ + ++N S P+ L L F T ++ Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGDIESIEN-SHPVFFLVLYDFATTSE 317 Score = 26.6 bits (56), Expect = 4.0 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 371 LAESYGVRGYPTLKFFRNGSPIDY 442 LA YG + P++ RNG PI Y Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVY 366 >SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 726 Score = 35.5 bits (78), Expect = 0.009 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +2 Query: 260 CGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433 CG CK L P + K E E S +VD ++E L+ +R PTL ++NG Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAVPTLYLYQNGEI 111 Query: 434 ID 439 ++ Sbjct: 112 VE 113 Score = 31.5 bits (68), Expect = 0.14 Identities = 14/78 (17%), Positives = 37/78 (47%) Frame = +2 Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433 S C C ++ + A ++ + +A ++ + + Y ++ +PT FF+ + Sbjct: 308 SECDDCDDVSTAWYAMANRM---RGKLNVAHINCAVSKRACKQYSIQYFPTFLFFKEEAF 364 Query: 434 IDYSGGRQADDIISWLKK 487 ++Y G D++S+ ++ Sbjct: 365 VEYVGLPNEGDLVSFAEE 382 >SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 318 Score = 28.3 bits (60), Expect = 1.3 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +2 Query: 266 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 445 +C L P +AA L + +SP L VDA + L S+GVR + G+ + Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240 Query: 446 GGRQA 460 G A Sbjct: 241 NGESA 245 >SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 27.1 bits (57), Expect = 3.0 Identities = 9/23 (39%), Positives = 18/23 (78%) Frame = +2 Query: 482 KKKTGPPAVRLPLLNRLKNLSMP 550 KK+ G P++ +P+L ++K+ S+P Sbjct: 329 KKREGSPSLPIPILPKMKDTSIP 351 >SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 1283 Score = 26.6 bits (56), Expect = 4.0 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +3 Query: 225 TEYILVEFYAH-GAATANLWHRN 290 T+ I + +AH G ATA +W+RN Sbjct: 5 TDLIFLAIFAHIGKATAKVWNRN 27 >SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 3699 Score = 26.2 bits (55), Expect = 5.3 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 357 VASTFASLIGDSSSASFVAALAYSGARDLQW 265 V++ F SL+G S FVA + R L+W Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069 >SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 747 Score = 25.8 bits (54), Expect = 7.0 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 Query: 113 NTHCDIIGTFLL 78 NTHCDI+ +FLL Sbjct: 275 NTHCDIVTSFLL 286 >SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces pombe|chr 1|||Manual Length = 383 Score = 25.4 bits (53), Expect = 9.3 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +1 Query: 532 KELIDANTVIVFGFFSDQSSTRAKTFLST--AQVVDDQVFAIVSDEKVIKELEA 687 K+ + ++ +G F T FLST +++++Q + EK++KE+ + Sbjct: 77 KDTTNRDSPFFYGLFDGHGGTECSEFLSTNLGKIIENQ--DLNDTEKILKEVHS 128 >SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr 1|||Manual Length = 594 Score = 25.4 bits (53), Expect = 9.3 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +2 Query: 464 DIISWLKKKTGPPAVRLPLLNRLKNLSMPILLLYL 568 +++ W K P V LPL+ RLK +L+L Sbjct: 549 ELVDWGKAVAPPTPVLLPLITRLKRTLFGKNMLHL 583 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,970,333 Number of Sequences: 5004 Number of extensions: 56845 Number of successful extensions: 202 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 192 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 381366860 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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