Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00542
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 90 3e-19
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 75 9e-15
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 55 1e-08
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 51 2e-07
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 5e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 42 8e-05
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 42 1e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.009
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 28 1.3
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 27 3.0
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 27 4.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 5.3
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 7.0
SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 25 9.3
SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 9.3
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 90.2 bits (214), Expect = 3e-19
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCGHCK+LAPEY AA +L E+ I L +VD T+E DL Y +RGYPTL F+NG I
Sbjct: 50 WCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQI 107
Query: 437 -DYSGGRQADDIISWLKKKTGP 499
YSG R+ D ++ +++K+ P
Sbjct: 108 SQYSGPRKHDALVKYMRKQLLP 129
Score = 66.1 bits (154), Expect = 5e-12
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG--- 427
WCGHCK+LAP Y K A + + ++S + +AK+DAT E D+ S + G+PT+ FF+
Sbjct: 384 WCGHCKNLAPTYEKLAEEYS-DDSNVVVAKIDAT-ENDI--SVSISGFPTIMFFKANDKV 439
Query: 428 SPIDYSGGRQADDIISWLKK 487
+P+ Y G R +D+ +++ K
Sbjct: 440 NPVRYEGDRTLEDLSAFIDK 459
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 168 TEENVLVLSKANFETVI-STTEYILVEFYA 254
++E+++VL NF+ ++ T+ +LVEFYA
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYA 382
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 75.4 bits (177), Expect = 9e-15
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS 430
+WCGHCKSLAP Y + L E+ + + + K+DA D+A+ Y + G+PTL +F +GS
Sbjct: 49 TWCGHCKSLAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGS 107
Query: 431 -PIDYSGGRQADDIISWLKKKTG 496
P+ YS R D + ++ +KTG
Sbjct: 108 EPVQYSNARDVDSLTQFVSEKTG 130
Score = 59.7 bits (138), Expect = 5e-10
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNG 427
WCG+CK LAP Y + K+ + E +++ K++A D+ + V +PT+KFF
Sbjct: 169 WCGYCKRLAPTY-ETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKD 227
Query: 428 SPIDYSGGRQADDIISWLKKKTG 496
P Y G R + +I ++ KK+G
Sbjct: 228 KPELYEGDRSLESLIEYINKKSG 250
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCG CK+++P +++ A+K A + AKV+ +++ +A GV+ PT FF NG I
Sbjct: 30 WCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQI 87
Query: 437 DYSGG 451
D G
Sbjct: 88 DMLTG 92
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 50.8 bits (116), Expect = 2e-07
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNG 427
WCG+CK L P Y K A+ L P+ DA Q + + Y V+G+PT+K G
Sbjct: 59 WCGYCKKLVPTYQKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKG 117
Query: 428 SPI---DYSGGR 454
S + DY+G R
Sbjct: 118 SSLSSTDYNGDR 129
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 46.4 bits (105), Expect = 5e-06
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCG CK L P KL+E+ V+A + D+A+ GV PT+ FR G +
Sbjct: 46 WCGPCKYLKP----FLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQEL 101
Query: 437 DYSGGRQADDIISWLKK 487
D G + S L K
Sbjct: 102 DRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 42.3 bits (95), Expect = 8e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433
+WCG CK++AP++ + + S KVD Q ++A GV P+ ++NG
Sbjct: 28 TWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEK 83
Query: 434 ID 439
I+
Sbjct: 84 IE 85
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/111 (19%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 266 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 445
HC+ A ++ + +K+A+V+ +E+++ + ++ +PT + F+ I Y+
Sbjct: 208 HCEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYN 267
Query: 446 GGRQADDIISWLKKKTGPPAVRLPL--LNRLKNLSMPILLLYLVSFRTRAQ 592
G + ++S+ + A+++ + ++N S P+ L L F T ++
Sbjct: 268 GPLKYQQLLSYSNQVASYQAIKIEEGDIESIEN-SHPVFFLVLYDFATTSE 317
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 371 LAESYGVRGYPTLKFFRNGSPIDY 442
LA YG + P++ RNG PI Y
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVY 366
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 260 CGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433
CG CK L P + K E E S +VD ++E L+ +R PTL ++NG
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAVPTLYLYQNGEI 111
Query: 434 ID 439
++
Sbjct: 112 VE 113
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/78 (17%), Positives = 37/78 (47%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433
S C C ++ + A ++ + +A ++ + + Y ++ +PT FF+ +
Sbjct: 308 SECDDCDDVSTAWYAMANRM---RGKLNVAHINCAVSKRACKQYSIQYFPTFLFFKEEAF 364
Query: 434 IDYSGGRQADDIISWLKK 487
++Y G D++S+ ++
Sbjct: 365 VEYVGLPNEGDLVSFAEE 382
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 266 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 445
+C L P +AA L + +SP L VDA + L S+GVR + G+ +
Sbjct: 183 YCAYLVPNEHEAAILLNQADSPATLENVDAYASKLL--SFGVRKAVIITLGSQGAYYKSA 240
Query: 446 GGRQA 460
G A
Sbjct: 241 NGESA 245
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 482 KKKTGPPAVRLPLLNRLKNLSMP 550
KK+ G P++ +P+L ++K+ S+P
Sbjct: 329 KKREGSPSLPIPILPKMKDTSIP 351
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 225 TEYILVEFYAH-GAATANLWHRN 290
T+ I + +AH G ATA +W+RN
Sbjct: 5 TDLIFLAIFAHIGKATAKVWNRN 27
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 357 VASTFASLIGDSSSASFVAALAYSGARDLQW 265
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 113 NTHCDIIGTFLL 78
NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286
>SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 532 KELIDANTVIVFGFFSDQSSTRAKTFLST--AQVVDDQVFAIVSDEKVIKELEA 687
K+ + ++ +G F T FLST +++++Q + EK++KE+ +
Sbjct: 77 KDTTNRDSPFFYGLFDGHGGTECSEFLSTNLGKIIENQ--DLNDTEKILKEVHS 128
>SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 464 DIISWLKKKTGPPAVRLPLLNRLKNLSMPILLLYL 568
+++ W K P V LPL+ RLK +L+L
Sbjct: 549 ELVDWGKAVAPPTPVLLPLITRLKRTLFGKNMLHL 583
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,970,333
Number of Sequences: 5004
Number of extensions: 56845
Number of successful extensions: 202
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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