Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00542
(785 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 134 8e-32
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 101 9e-22
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 83 2e-16
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 76 4e-14
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 69 4e-12
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 65 7e-11
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 52 4e-07
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 52 7e-07
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 46 3e-05
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 46 3e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 44 2e-04
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 38 0.009
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 30 2.4
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 3.2
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 29 5.6
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 5.6
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 28 7.5
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.9
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 134 bits (324), Expect = 8e-32
Identities = 70/156 (44%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCGHCK+LAPEYAKAA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P
Sbjct: 52 WCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPS 111
Query: 437 DYSGGRQADDIISWLKKKTGPPAVRLPLLNRLKNLSMPILLLYLVSFRTRAQPEPKLSFQ 616
+Y+GGR A +I+SWL KKTGPPA L + +K+ + +V F T + + +F
Sbjct: 112 EYAGGRTAPEIVSWLNKKTGPPAKDLATADAMKDFITKEVA--VVGFFTDKESDAAKAFL 169
Query: 617 XXXXXXXXXXXXSAMRK-*SRSWRLKMKMLCFSRTS 721
K +S +L+ LCFSR++
Sbjct: 170 SAADGIDDVEFGIVSDKLLPQSTKLRETRLCFSRSA 205
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSP 433
WCGHCK LAP + + K ++ + I +AK+D+T + E V +PT+K+F + G
Sbjct: 413 WCGHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEA 469
Query: 434 IDYSGGRQADDIISWLK 484
+DY+GGR DD + +L+
Sbjct: 470 VDYNGGRTLDDFVKFLE 486
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 36/50 (72%)
Frame = +3
Query: 105 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYA 254
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEFYA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYA 50
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 105 bits (253), Expect = 3e-23
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCGHCKSLAPEYAKAA K+ + P+ AK+DAT D+A+ + V GYPTLK FR G+P
Sbjct: 89 WCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPY 148
Query: 437 DYSGGRQADDIISWLKKKTGP 499
+Y G R+ I+ ++KK++ P
Sbjct: 149 EYEGPREESGIVEYMKKQSDP 169
Score = 100 bits (239), Expect = 2e-21
Identities = 46/94 (48%), Positives = 61/94 (64%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCGHCK LAPEY KAA +L + + PI LA VDAT E +LA+ Y V+GYPTLK FR G
Sbjct: 204 WCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKAT 263
Query: 437 DYSGGRQADDIISWLKKKTGPPAVRLPLLNRLKN 538
+Y G R I S+++ + GP + L L +++
Sbjct: 264 EYKGQRDQYGIASYMRSQVGPSSRILSSLKAVQD 297
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG--- 427
WCG +L P + K +++ I +AK+DAT D+ +Y V G+PT+ F +
Sbjct: 554 WCGI--ALEPTFKKLGKHFRNDKN-IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKK 609
Query: 428 SPIDYSGGRQADDIISWLKKK 490
+PI + GGR+ D+I ++++K
Sbjct: 610 NPIKFDGGRELKDLIKFVEEK 630
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 156 DEVPTEENVLVLSKANFETVISTTEYILVEFYA 254
DEV E++V VL+ NF+ VI ILVEFYA
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYA 87
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 101 bits (241), Expect = 9e-22
Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGS- 430
WCGHCK LAPEY AA L + + P+ LAKVD T+ +D YGV GYPTLK FRNG
Sbjct: 566 WCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEM 625
Query: 431 PIDYSGGRQADDIISWLKKKTGPPAVRLPLLNRLK 535
DY G R + II ++KK+ GP +V + ++ L+
Sbjct: 626 SKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLE 660
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRG 397
WCGHCKSL P+Y + KL ++ I +AK+DAT D ++ V+G
Sbjct: 891 WCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDAT-ANDAPPNFSVQG 935
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 383 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVRL 514
+G+ +PTLK FR G P DY+G + + S++ + G RL
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 492
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-- 430
WCGHCK LAP Y + + S + +AKVDA ++DL + V+G+PT+K+F GS
Sbjct: 50 WCGHCKQLAPTYEQLGEAYTQS-SDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTT 108
Query: 431 PIDYSGGRQADDIISWLKKKTGPPAVRLPLL 523
P +Y+GGR +D I ++++KTG R+P++
Sbjct: 109 PEEYNGGRDINDFIKFIEEKTGVRG-RVPVI 138
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 168 TEENVLVLSKANFETVISTTEYILVEFYA 254
T+ V+ L+K NF+ V++ ++ LVEFYA
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYA 48
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 75.8 bits (178), Expect = 4e-14
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG--- 427
WCGHC+ LAPE+AKAAT+L + +K+ +DAT A Y V+GYPT+K F G
Sbjct: 108 WCGHCQRLAPEWAKAATEL---KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKN 164
Query: 428 --SPIDYSGGRQADDIISWLKKKTG----PPAVRLPLLNRL 532
S DY GGR A DII + K PP V + N +
Sbjct: 165 SHSVEDYQGGRTASDIIQYALDKAADSIEPPEVIQAISNEV 205
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 365 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 472
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-P 433
WCGHCK+ P+Y KAA ++ + + AK+D T+ D+ + V GYPTL+++ G
Sbjct: 175 WCGHCKNAKPKYEKAAETFKDQPNRV-FAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFV 233
Query: 434 IDYSGGRQADDIISWLKKKTGP 499
++Y G R +D+IS++++ P
Sbjct: 234 VEYDGDRVTEDLISFMEEPPLP 255
Score = 63.7 bits (148), Expect = 2e-10
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WCGHC + P Y KAA L +E++ LA VD T+ +D+A+ + GYPT+K ++ +
Sbjct: 78 WCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTA 137
Query: 437 DYSGGRQADDIISWL 481
+ + ++ L
Sbjct: 138 KAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 64.9 bits (151), Expect = 7e-11
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 406
WCGHCK++ PEY AA L E+E P LA VDAT+E L + + V GYPT
Sbjct: 110 WCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 21/103 (20%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATK--------------------LAEEESPIKLAKVDATQEQDLA 376
WCGHCK PE AA L I A VD T+E +
Sbjct: 223 WCGHCKKAKPELMSAAKHHKDKNKRALSLRDFDFSNDTLCNRRRLIAYAAVDCTKEMAVC 282
Query: 377 ESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 502
+ +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 283 QQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 260 CGHCKSLAPEYAKAATKLAEE 322
CG+CK PE+A AAT+ +E
Sbjct: 11 CGYCKRFKPEFAAAATEHKDE 31
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD--LAESYGVRGYPTLKFFRNGS 430
WC HC+ L P+ AA LA + + AKVD T + L +++ + GYP++K F+ G
Sbjct: 48 WCHHCQELLPQLEGAANALA-AKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGK 106
Query: 431 PI-DYSGGRQADDIISWLKKKTGPPAVRLPLLNRLKNLSMPILLLYLVSFRTRAQPEP 601
DY G R ++++++ T + + P + N + ++ F + P+P
Sbjct: 107 YAGDYIGQRTDAALVNYMESVTSTASQQAPFTSEPMNNAAQLMQPQTQPFAPQQAPQP 164
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/76 (35%), Positives = 35/76 (46%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WC C L PEY KAA + P+ VD T L Y +R YPT + N P
Sbjct: 313 WCPPCMRLLPEYRKAARSFVGK--PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPH 370
Query: 437 DYSGGRQADDIISWLK 484
+ G A DII +++
Sbjct: 371 QFIGHHNALDIIEFVE 386
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF 418
WCG C AP+Y + A L + ++ AKV+ Q+ L + YPT++ +
Sbjct: 462 WCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQDYGLCSEANIHSYPTVRLY 512
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433
SWCG CKS+AP Y+ L+E+ K+D Q+LA GV PT +FF+N
Sbjct: 37 SWCGPCKSIAPVYSG----LSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVK 92
Query: 434 IDYSGGRQADDIISWLKKKTG 496
+D G + +KK G
Sbjct: 93 VDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 433
+WCG CKS+AP + + K + + KVD Q Q AES G+R PT F+ N +
Sbjct: 38 TWCGPCKSIAPVFTNLSMKFMD----VVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAK 93
Query: 434 ID 439
ID
Sbjct: 94 ID 95
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 278 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 457
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +G Y+G R
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRN 60
Query: 458 ADDIISWLKK 487
A+D+ ++ K
Sbjct: 61 AEDMKVFVDK 70
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 227 GVHFS*ILCSWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 406
G+HF WC HC LAP + + A ++ + I ++K++ GYPT
Sbjct: 107 GLHFVKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISKIN--------------GYPT 151
Query: 407 LKFFRNG-SPIDYSGGRQADDIISWL 481
L F++G +YSG R D + ++
Sbjct: 152 LMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAK 346
WCGHCK LAPEY AA L + + P+ LAK
Sbjct: 41 WCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATK-LAEEESPIKLAKVDATQE----QDLAESYGVRGYPTLKFFR 421
WC HCK +AP+Y A + L + ++LAKVD + + + Y V+ PT+ F
Sbjct: 162 WCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFH 221
Query: 422 NGSPID 439
+G ++
Sbjct: 222 DGKFVE 227
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 144 LALGDEVPTEENVLV-LSKANFETVISTTEYILVEFYA 254
L D VP +E L+ L +NFE + +++LV+FYA
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYA 160
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 165 PTEENVLVLSKANFETVISTTEYILVEFYA 254
P VL L+ NF I EY+LV+FYA
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYA 77
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKV 349
WC C+ L+P + AA +L + ++ AKV
Sbjct: 79 WCSDCQRLSPLFDTAALQLRDNNPSLRFAKV 109
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G I
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 437 D 439
+
Sbjct: 59 N 59
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 436
WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G +
Sbjct: 48 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVM 104
Query: 437 DY 442
++
Sbjct: 105 EH 106
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNG 427
WCG C + AP A + ++ S + + ++DA Q DL + V YP++ F R
Sbjct: 546 WCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNLTVSSYPSIILFPAGRKD 603
Query: 428 SPIDYSGG--RQADDIISWLKKKTGPPAVRLPLLNRLKNLSMPILLL 562
S I + R A +I ++++ G A+R+ L R ++ L+
Sbjct: 604 SSIAFPSNTPRTATRLIEFIEEH-GSEALRVALYGRTDGFNVSEALI 649
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKL-AKVDATQEQDLAESYGVRGYPTLKFFRNG 427
WC C +L P+Y KAA LA+E + A ++ Q GV + TL + G
Sbjct: 50 WCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTIG 107
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 383 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVRL 514
+G+ +PTLK FR G P DY+G + + S++ + G RL
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 352
+WCG C+ + P++ ++A+E +K AKVD
Sbjct: 21 TWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 177 NVLVLSKANFETVISTTEYILVEFYA 254
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 254 SWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 370
+WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 7 NWCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 389 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 481
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 257 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 361
WCG C+ + P++ K A EE + AK+D +
Sbjct: 41 WCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 664 KVIKELEAEDEDVVLFKNFEEKRVKYEDEE 753
+V KELEAE E L K EE+R++ E+EE
Sbjct: 1423 EVQKELEAEMEMERLQKENEEERLRKEEEE 1452
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 613 STAQVVDDQVFAIVSDEKVIKELEAEDEDVVLFKNFEEKRVKYEDEESLRSA 768
+TA +Q A DEK E +EDV L+K+ EEK+ + + SL A
Sbjct: 899 ATADQAKEQDSATFPDEKSDGENVDIEEDVPLWKDNEEKQEAQKHQRSLPQA 950
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 335 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 436
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 332 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 448
+ +A V+ +E +LA+ GV+ + F G ++Y G
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYYG 142
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +1
Query: 664 KVIKELEAEDEDVVLFKNFEEKRVKYEDEESLR 762
+++ E+ E++D V+F+ E++ V ED+E ++
Sbjct: 99 QIMNEVGEEEDDDVIFEEAEKEEVGVEDKEEVK 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,183,141
Number of Sequences: 59808
Number of extensions: 425842
Number of successful extensions: 1285
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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