Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00540
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.73 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   3.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   3.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 623 LYSIQFLKCCINTFKYKLKNLFHC 552
           ++++ ++ CC N F   L+ +F C
Sbjct: 154 IFNLVYVYCCDNNFNVFLRQVFTC 177


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 372 CYFHKIVSFSVIYCYYYFF 316
           C ++   +F ++ C YYF+
Sbjct: 99  CTYYFYYAFIILLCVYYFY 117



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 372 CYFHKIVSFSVIYCYYYFF 316
           C ++ +V    + C YYF+
Sbjct: 132 CIYYFVVPLFFLLCIYYFY 150


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 363 HKIVSFSVIYCYYYFFSVNTF 301
           H+I S+ ++  Y  F SV+TF
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTF 44


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 363 HKIVSFSVIYCYYYFFSVNTF 301
           H+I S+ ++  Y  F SV+TF
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTF 44


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 177 FYASI*RKGKVTDFSIN 227
           FY  + +  K+TDFSI+
Sbjct: 291 FYQEVKKPKKITDFSIS 307


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 144 YIITGVVFVNYKLLNNTL 91
           Y+IT ++ + YK LN  +
Sbjct: 168 YLITDMILMRYKELNRVI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,789
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)