Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00539
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 54 8e-08
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 29 2.5
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 2.5
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.5
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 29 2.5
U00047-11|AAU20827.1| 313|Caenorhabditis elegans Hypothetical p... 27 7.7
U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical p... 27 7.7
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 27 7.7
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 54.0 bits (124), Expect = 8e-08
Identities = 29/93 (31%), Positives = 55/93 (59%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAG 432
+ T+KE +A+N+SLAE+NL ++P ++ K + + + ++L + L + S+
Sbjct: 53 MPTDKESALAANKSLAEWNLAQKPRIDAAKTQTVDLYDQVKKLQGEVAVLKSQLDSVSSS 112
Query: 433 ISPDTTHALLQTAAAESEEQSDNIAKTFYLENG 531
S DTT +L+Q AA E+++ ++ + F ENG
Sbjct: 113 KSLDTTSSLMQVAAQEADDDAEALFTQF--ENG 143
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 370 GEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQS---DNIAKTFYLENGC 534
G QLC + L + +S+ +P T L T + + S D K Y ENGC
Sbjct: 427 GMQLCIELCVLSTKFTCRSSTFNPITGQCRLMTEDSMTSPDSFEYDEFQKALYFENGC 484
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1569 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1908 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1228 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1270
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1566 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1569 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1908 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1566 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1569 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1908 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1228 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1270
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1566 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 LDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 381
LD K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1568 LDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1610
>U00047-11|AAU20827.1| 313|Caenorhabditis elegans Hypothetical
protein ZK418.2b protein.
Length = 313
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 313 GKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAG 432
GK+ ++E++K E+ E L + I EL+DD+KT G
Sbjct: 271 GKKVKIEKVKKEIGESWTLIDS----ILELIDDFKTSVCG 306
>U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical
protein ZK418.2a protein.
Length = 471
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 313 GKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAG 432
GK+ ++E++K E+ E L + I EL+DD+KT G
Sbjct: 429 GKKVKIEKVKKEIGESWTLIDS----ILELIDDFKTSVCG 464
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 247 QRLDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQEL 402
++L+ EKE I+ + +L +E ++AEL+++ + QL T Q L
Sbjct: 318 EQLEQEKEKLISEKEHAKQTHLKLAAAVENVEAELEKQGKEWIQLSTHNQTL 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,084,029
Number of Sequences: 27780
Number of extensions: 186603
Number of successful extensions: 535
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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