Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00539
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.3  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   9.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.2  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 594 FVLPICICLRMGSKSSRNLSTPIFQIKSLC 505
           FV+   IC+ +G+ +   L T I  ++ +C
Sbjct: 4   FVIIFAICVCVGAMTHEELKTGIQTLQPIC 33


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 441 RYNSCTSANSSSRIRRTVR 497
           R NSC   N+SSR+   +R
Sbjct: 371 RQNSCNIYNASSRMENNLR 389


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 244 GQRLDTEKEMFIASNRSLAEFNLGKEPEL 330
           G R+D    +F ++N SL E  LGK   L
Sbjct: 226 GFRIDAVPHLFESANISLDEPPLGKNLNL 254


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 533 VDKFLEDFEPIRKQMH 580
           + KFL+D   ++KQ+H
Sbjct: 23  ISKFLKDRPYVQKQLH 38


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 457 LLQTAAAESEEQSDNIAKTFYLENG 531
           ++  AAA+   +   I K++ +ENG
Sbjct: 1   MMAVAAAQKNREMFAIKKSYSIENG 25


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 158 LLAHLNSNELKEMLNDDAKFESVLKDVKQVKD 253
           L+  + SNE    + DD   E++  +V   KD
Sbjct: 17  LIIFIYSNETIAQVTDDENCETLQSEVHITKD 48


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 158 LLAHLNSNELKEMLNDDAKFESVLKDVKQVKD 253
           L+  + SNE    + DD   E++  +V   KD
Sbjct: 17  LIIFIYSNETIAQVTDDENCETLQSEVHITKD 48


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 134 SDYPSVMGLLAHLNSNELKEMLNDDA 211
           +D+PSV  LL        ++  NDDA
Sbjct: 208 TDHPSVAYLLVGSLKGIARQFYNDDA 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,075
Number of Sequences: 438
Number of extensions: 2130
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)