Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00537
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0Q8I5 Cluster: ATP-binding cassette (ABC) superfamily ...    33   7.9  

>UniRef50_A0Q8I5 Cluster: ATP-binding cassette (ABC) superfamily
           protein; n=13; Francisella tularensis|Rep: ATP-binding
           cassette (ABC) superfamily protein - Francisella
           tularensis subsp. novicida (strain U112)
          Length = 513

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +3

Query: 162 ANNLFSLIQMTHE---QFGSY*YRSQNSILTKVRANMWC*ILDGFTNIFKVVLCKMVKKG 332
           + N++ ++    E   +F S+  R + S + KV A + C  LD   N F VVL + V  G
Sbjct: 186 STNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKL-CNYLDARANFFSVVLRQHVYIG 244

Query: 333 LSFAYIMNVICFISRWL 383
           L++ +I  ++  I  +L
Sbjct: 245 LTYIFINILLLGIGSYL 261


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,584,005
Number of Sequences: 1657284
Number of extensions: 13248413
Number of successful extensions: 21129
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21127
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)