Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00537
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155...    28   7.2  
09_04_0712 + 19670279-19670570,19670676-19670767,19671360-196714...    28   9.5  

>09_06_0148 -
           21214460-21214561,21214993-21215339,21215428-21215538,
           21215673-21215835,21215921-21215999,21216110-21216228
          Length = 306

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 392 NWPNFMTFTLLCLHRYYVSIIKHIQMKWFFR 484
           ++P   T     L RYY+S++ H +  +FFR
Sbjct: 81  SFPATTTSASYVLRRYYLSLLHHYEQVYFFR 111


>09_04_0712 +
           19670279-19670570,19670676-19670767,19671360-19671487,
           19671615-19671750,19671838-19671889,19671994-19672094,
           19672577-19672753,19673370-19673527,19674002-19674107,
           19674636-19674806
          Length = 470

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 330 GLSFAYIMNVICFISRWLYHQI 395
           GL F Y      F+SRW+ HQ+
Sbjct: 246 GLQFVYGFESFFFVSRWVMHQL 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,615,927
Number of Sequences: 37544
Number of extensions: 322810
Number of successful extensions: 471
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)