Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00537
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68104-2|CAA92113.1|  359|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ...    30   2.1  
U80023-11|AAG24044.1|  331|Caenorhabditis elegans Seven tm recep...    29   2.8  
AF016447-5|AAX22290.1|  397|Caenorhabditis elegans Serpentine re...    29   2.8  
Z82051-6|CAB04821.1|  354|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>Z68104-2|CAA92113.1|  359|Caenorhabditis elegans Hypothetical
           protein F08B12.2 protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = +3

Query: 315 KMVKKGLSFAYIMNVICFISRWLYHQIGLIL*HL 416
           K VK  L  AYI+N     S WLY   G+IL HL
Sbjct: 170 KAVKSALQLAYILNRSSIHSPWLYFS-GVILKHL 202


>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
           protein R10F2.6 protein.
          Length = 1150

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 389 VIKPSTDKTNNIHNVSK*QAFFHHFT*YNFKDVGKTIQNLAPHIGSHFR 243
           V K ST    ++  +SK +A F      NFK + + IQNL    G H R
Sbjct: 45  VKKQSTGGEKHLAAISKNEATFEVSEDANFKKINEDIQNLKSEFGIHPR 93


>U80023-11|AAG24044.1|  331|Caenorhabditis elegans Seven tm receptor
           protein 47 protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = +2

Query: 404 FMTFTLLCLHRYYVSIIKHIQMKWFFRYRIVI 499
           F+  T++    +Y+ ++ HI +++ FRY +++
Sbjct: 88  FLKLTMIFYSSFYIVMLSHISVQFLFRYLVLV 119


>AF016447-5|AAX22290.1|  397|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 19 protein.
          Length = 397

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = -2

Query: 589 VANSKFVQITTNAKRYLFTILYGSI*LIQTYYYSVSEKPFHLNMLDDTYIISM 431
           V +S+F+ I T ++  +F ++Y  + L   Y+Y+ + +P HL +    Y+  +
Sbjct: 296 VDSSEFLYIVTISQA-VFIVVYPVLSLSMRYFYAETYRPVHLTIATLVYVFDI 347


>Z82051-6|CAB04821.1|  354|Caenorhabditis elegans Hypothetical
           protein T23D5.9 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 359 YLFYQ*MALSPNWPNFMTFTLLCLHRYYVSIIKHIQMKWFFRYRIVICLYKLN 517
           ++++   +L   +P F  F +L    +Y+ I+  I +++ FRY     LYK N
Sbjct: 73  FVYFSLNSLIQEYPYFFQFAILLYASFYIVILAIIAVQFAFRYS---TLYKPN 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,945,454
Number of Sequences: 27780
Number of extensions: 346892
Number of successful extensions: 533
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)