Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00535
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 293 1e-79
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 293 1e-79
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 293 1e-79
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 293 1e-79
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 266 9e-72
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 266 9e-72
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 265 2e-71
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 265 2e-71
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 265 3e-71
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 259 1e-69
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 259 1e-69
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 257 8e-69
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 247 8e-66
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 245 2e-65
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 221 3e-58
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 206 1e-53
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 135 3e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 135 4e-32
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 134 5e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 134 5e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 76 3e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 76 3e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.54
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.9
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 29 2.9
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.9
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.9
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 6.6
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 8.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 8.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 8.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 8.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 8.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 8.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 8.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 8.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 293 bits (718), Expect = 1e-79
Identities = 136/212 (64%), Positives = 153/212 (72%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HV
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHV 62
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD CTGLQGFL+FHS G + +
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVV 182
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDC+FMVDNEAIYDICR
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICR 214
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 728 PRNLDIERPTYT 763
RNLDIERP+YT
Sbjct: 214 RRNLDIERPSYT 225
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 293 bits (718), Expect = 1e-79
Identities = 136/212 (64%), Positives = 153/212 (72%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HV
Sbjct: 2 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHV 61
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 62 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 121
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD CTGLQGFL+FHS G + +
Sbjct: 122 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVV 181
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDC+FMVDNEAIYDICR
Sbjct: 182 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICR 213
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 153 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 212
Query: 728 PRNLDIERPTYT 763
RNLDIERP+YT
Sbjct: 213 RRNLDIERPSYT 224
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 293 bits (718), Expect = 1e-79
Identities = 136/212 (64%), Positives = 153/212 (72%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HV
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHV 62
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD CTGLQGFL+FHS G + +
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVV 182
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDC+FMVDNEAIYDICR
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICR 214
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 728 PRNLDIERPTYT 763
RNLDIERP+YT
Sbjct: 214 RRNLDIERPSYT 225
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 293 bits (718), Expect = 1e-79
Identities = 136/212 (64%), Positives = 153/212 (72%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HV
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHV 62
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD CTGLQGFL+FHS G + +
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVV 182
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDC+FMVDNEAIYDICR
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICR 214
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 728 PRNLDIERPTYT 763
RNLDIERP+YT
Sbjct: 214 RRNLDIERPSYT 225
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 266 bits (653), Expect = 9e-72
Identities = 126/212 (59%), Positives = 147/212 (69%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDICR
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 212
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNLD+ERP+YT
Sbjct: 212 RRNLDVERPSYT 223
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 266 bits (653), Expect = 9e-72
Identities = 126/212 (59%), Positives = 147/212 (69%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDICR
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 212
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNLD+ERP+YT
Sbjct: 212 RRNLDVERPSYT 223
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 265 bits (650), Expect = 2e-71
Identities = 125/212 (58%), Positives = 147/212 (69%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDICR
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 212
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/72 (58%), Positives = 47/72 (65%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNL ++RP+YT
Sbjct: 212 RRNLSVDRPSYT 223
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 265 bits (650), Expect = 2e-71
Identities = 125/212 (58%), Positives = 147/212 (69%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDICR
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 212
Score = 77.8 bits (183), Expect = 8e-15
Identities = 41/72 (56%), Positives = 46/72 (63%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQV TAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNL ++RP+YT
Sbjct: 212 RRNLSVDRPSYT 223
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 265 bits (649), Expect = 3e-71
Identities = 127/222 (57%), Positives = 150/222 (67%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGKHV
Sbjct: 8 EVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHV 67
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+
Sbjct: 68 PRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRV 127
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+L + C GLQGFL+FHS G + +
Sbjct: 128 RRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMV 187
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICRVISTLSAQPT 761
HSDC+FMVDNEAIYDICR L A+PT
Sbjct: 188 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDL-ARPT 228
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/72 (58%), Positives = 46/72 (63%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF IYPAPQVST++VEPYNSI F +
Sbjct: 159 MERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 218
Query: 728 PRNLDIERPTYT 763
RNLD+ RPTYT
Sbjct: 219 RRNLDLARPTYT 230
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 259 bits (635), Expect = 1e-69
Identities = 122/212 (57%), Positives = 145/212 (68%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDIC+
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICK 212
Score = 82.6 bits (195), Expect = 3e-16
Identities = 43/72 (59%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNLD++RP+YT
Sbjct: 212 KRNLDVDRPSYT 223
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 259 bits (635), Expect = 1e-69
Identities = 122/212 (57%), Positives = 145/212 (68%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++V
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LAD C+GLQGF +FHS G + +
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDCAFMVDNEAIYDIC+
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICK 212
Score = 82.6 bits (195), Expect = 3e-16
Identities = 43/72 (59%), Positives = 48/72 (66%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSI F +
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 728 PRNLDIERPTYT 763
RNLD++RP+YT
Sbjct: 212 KRNLDVDRPSYT 223
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 257 bits (629), Expect = 8e-69
Identities = 119/213 (55%), Positives = 145/213 (68%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKHV
Sbjct: 3 EIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHV 62
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRV 122
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+L ++C LQGFLIFHS G + +
Sbjct: 123 RRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMV 182
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICRV 734
HSDC+F++DNEAIY+I +V
Sbjct: 183 EPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKV 215
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/72 (48%), Positives = 44/72 (61%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYNS+ F +
Sbjct: 154 MERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEIT 213
Query: 728 PRNLDIERPTYT 763
NL + PTYT
Sbjct: 214 KVNLGVRSPTYT 225
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 247 bits (604), Expect = 8e-66
Identities = 122/222 (54%), Positives = 143/222 (64%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKHV
Sbjct: 9 EVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHV 68
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
++LA+ C GLQGF+IFHS G L +
Sbjct: 129 KRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMV 188
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICRVISTLSAQPT 761
HSDC FMVDNEAIYDICR L A+PT
Sbjct: 189 EPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDL-ARPT 229
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/72 (55%), Positives = 45/72 (62%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLS +YGKK KLEFAIYPAPQVST++VEPYNSI F +
Sbjct: 160 MERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDIC 219
Query: 728 PRNLDIERPTYT 763
RNLD+ RPTYT
Sbjct: 220 RRNLDLARPTYT 231
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 245 bits (600), Expect = 2e-65
Identities = 118/212 (55%), Positives = 136/212 (64%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+HV
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRI
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
R+LA+ C GLQGF +FHS G +
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVV 179
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
HSDC+FMVDNEAIYDICR
Sbjct: 180 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICR 211
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/71 (53%), Positives = 44/71 (61%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYNSI F +
Sbjct: 151 MERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 210
Query: 728 PRNLDIERPTY 760
RNL + RPTY
Sbjct: 211 RRNLRVSRPTY 221
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 221 bits (541), Expect = 3e-58
Identities = 105/212 (49%), Positives = 130/212 (61%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+C+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKHV
Sbjct: 7 ECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHV 65
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRI
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 456 RKLADQCTGLQGFLIFHSSVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXX 635
RK + C GLQGFL+FHS G + +
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVV 185
Query: 636 XXXXXXXXXXXXXXHSDCAFMVDNEAIYDICR 731
SDC+FMVDNEAIYD+CR
Sbjct: 186 EPYNSILTTHTTLELSDCSFMVDNEAIYDLCR 217
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLSV++GKKSKLEF++YPAPQVST+VVEPYNSI F +
Sbjct: 157 MERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLC 216
Query: 728 PRNLDIERPTYT 763
+ L +ERP+Y+
Sbjct: 217 RQKLHVERPSYS 228
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 206 bits (503), Expect = 1e-53
Identities = 104/202 (51%), Positives = 124/202 (61%)
Frame = +3
Query: 156 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 335
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 336 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSSV 515
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFHS
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 516 EVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDCAF 695
G L + HSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 696 MVDNEAIYDICRVISTLSAQPT 761
MVDNEAIYDICR L A+PT
Sbjct: 181 MVDNEAIYDICRRNLDL-ARPT 201
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/72 (55%), Positives = 45/72 (62%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXXCFHGRQ*SHL*HL 727
MERLS +YGKK KLEFAIYPAPQVST++VEPYNSI F +
Sbjct: 132 MERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDIC 191
Query: 728 PRNLDIERPTYT 763
RNLD+ RPTYT
Sbjct: 192 RRNLDLARPTYT 203
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 136 bits (329), Expect = 2e-32
Identities = 65/138 (47%), Positives = 87/138 (63%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK+V
Sbjct: 3 EIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 456 RKLADQCTGLQGFLIFHS 509
RK A+ C LQGF + HS
Sbjct: 121 RKEAEGCDCLQGFQLTHS 138
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 678 HSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D F +DNEA+YDIC LS PT + +H
Sbjct: 195 NTDETFCIDNEALYDICFRTLKLS-NPTYGDLNH 227
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 135 bits (327), Expect = 3e-32
Identities = 65/138 (47%), Positives = 88/138 (63%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+V
Sbjct: 3 EIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 456 RKLADQCTGLQGFLIFHS 509
RK A+ C LQGF + HS
Sbjct: 121 RKEAEGCDCLQGFQLTHS 138
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ ++ + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 678 HSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D + +DNEA+YDIC L+ PT + +H
Sbjct: 195 NTDETYCIDNEALYDICYRTLKLT-NPTYGDLNH 227
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 65/138 (47%), Positives = 88/138 (63%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+V
Sbjct: 3 EIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 456 RKLADQCTGLQGFLIFHS 509
RK A+ C LQGF + HS
Sbjct: 121 RKEAEGCDCLQGFQLTHS 138
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 678 HSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D + +DNEA+YDIC L+ PT + +H
Sbjct: 195 NTDETYCIDNEALYDICYRTLKLT-NPTYGDLNH 227
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 134 bits (325), Expect = 5e-32
Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+V
Sbjct: 3 EIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 456 RKLADQCTGLQGFLIFHS--SVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXX 629
RK A+ LQGF + HS +G+L + R +N
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI-SKIREEYPDRIMN-TFSVVPSPKVSDT 178
Query: 630 XXXXXXXXXXXXXXXXHSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D F +DNEA+YDIC L+ PT + +H
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTT-PTYGDLNH 227
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 134 bits (325), Expect = 5e-32
Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+V
Sbjct: 3 EIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 456 RKLADQCTGLQGFLIFHS--SVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXX 629
RK A+ LQGF + HS +G+L + R +N
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI-SKIREEYPDRIMN-TFSVVPSPKVSDT 178
Query: 630 XXXXXXXXXXXXXXXXHSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D F +DNEA+YDIC L+ PT + +H
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTT-PTYGDLNH 227
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ +Y + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 130 bits (314), Expect = 1e-30
Identities = 62/138 (44%), Positives = 83/138 (60%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ + + GQ G QIG WE+ EHGI P G D + + N +++E GK+V
Sbjct: 3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 456 RKLADQCTGLQGFLIFHS 509
RK A+ C LQGF + HS
Sbjct: 121 RKEAESCDCLQGFQMTHS 138
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 649
+ ++ +Y + + F++ P+P+VS VVEPYN+
Sbjct: 152 ISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNA 185
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 678 HSDCAFMVDNEAIYDICRVISTLSAQPTQPESSH 779
++D F +DNEA+YDIC L+ PT + +H
Sbjct: 195 NTDETFCIDNEALYDICFRTLKLTT-PTYGDLNH 227
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 78/232 (33%), Positives = 110/232 (47%), Gaps = 4/232 (1%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+V
Sbjct: 3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 456 RKLADQCTGLQGFLIFHS--SVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXX 629
R+ A+ L+GF + HS LGSL +S L S
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSL----LISKLREEYSDKTLSTCSIIPSAKVS 176
Query: 630 XXXXXXXXXXXXXXXXHSDC--AFMVDNEAIYDICRVISTLSAQPTQPESSH 779
+C F +DNEAI+DIC+ L + T + +H
Sbjct: 177 DTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 652
+ +L +Y K+ +I P+ +VS VVEPYN+I
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 78/232 (33%), Positives = 110/232 (47%), Gaps = 4/232 (1%)
Frame = +3
Query: 96 QCISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 275
+ I+V VGQ G QIG WE EHG+Q DG D G + +++ E K+V
Sbjct: 3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYV 60
Query: 276 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 455
PRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 456 RKLADQCTGLQGFLIFHS--SVEVPALGSLPY*WSVSPLTTARSLNWXXXXXXXXXXXXX 629
R+ A+ L+GF + HS LGSL +S L S
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSL----LISKLREEYSDKTLSTCSIIPSAKVS 176
Query: 630 XXXXXXXXXXXXXXXXHSDC--AFMVDNEAIYDICRVISTLSAQPTQPESSH 779
+C F +DNEAI+DIC+ L + T + +H
Sbjct: 177 DTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNH 228
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 548 MERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 652
+ +L +Y K+ +I P+ +VS VVEPYN+I
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 76.2 bits (179), Expect = 3e-14
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +3
Query: 102 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 281
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 282 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 452
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 453 IRKLADQCTGLQGFLIFHS 509
I + A+ L G L HS
Sbjct: 124 IIREAENTNNLDGILFTHS 142
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 76.2 bits (179), Expect = 3e-14
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +3
Query: 102 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 281
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 282 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 452
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 453 IRKLADQCTGLQGFLIFHS 509
I + A+ L G L HS
Sbjct: 124 IIREAENTNNLDGILFTHS 142
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 118 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 273
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +3
Query: 54 STFKHRKKLKSKCVQCIS----VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 221
+ F R +K +CI+ +V + QI +C CL +G++P G P I
Sbjct: 33 AAFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIET 92
Query: 222 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 320
G FF+++G ++ F ++ P DE
Sbjct: 93 G----RAFFTKSGLKRN---KKFANVSPQTADE 118
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 598 HLPRASGFHCRRRALQLYPHHPHNP 672
H P SG+H + YP+HP NP
Sbjct: 411 HEPAPSGYHPPQAQSNCYPNHPPNP 435
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +3
Query: 54 STFKHRKKLKSKCVQCIS----VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 221
+ F R +K +CI+ +V + QI +C CL +G++P G P I
Sbjct: 51 AAFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIET 110
Query: 222 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 320
G FF+++G ++ F ++ P DE
Sbjct: 111 G----RAFFTKSGLKRN---KKFANVSPQTADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +3
Query: 54 STFKHRKKLKSKCVQCIS----VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 221
+ F R +K +CI+ +V + QI +C CL +G++P G P I
Sbjct: 33 AAFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIET 92
Query: 222 GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 320
G FF+++G ++ F ++ P DE
Sbjct: 93 G----RAFFTKSGLKRN---KKFANVSPQTADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 380 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 285
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 309 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 452
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,696,419
Number of Sequences: 27780
Number of extensions: 404668
Number of successful extensions: 1126
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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