Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00535
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 4.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 4.3
AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 22 7.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 649 YPHHPHNPCSTLTVLSWSTMKPSMTS 726
+PH P P +T+T ++ +T + T+
Sbjct: 647 HPHEPGAPATTITTITTTTTTTTTTT 672
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 169 SRQ*SSQQALPIWTPAWPTCTEMHCTHFDLSFFLCLNVELNYNQSSFSATG 17
+R SS + L W+P P F++ + + +YN SS S G
Sbjct: 1015 ARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDG 1065
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 169 SRQ*SSQQALPIWTPAWPTCTEMHCTHFDLSFFLCLNVELNYNQSSFSATG 17
+R SS + L W+P P F++ + + +YN SS S G
Sbjct: 1011 ARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSVSGDG 1061
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 153 PSRHYRSGLR 124
P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 722 HLPRNLDIERPTYTT 766
HLP + + RP+YTT
Sbjct: 213 HLPGHAQMGRPSYTT 227
>AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein
75 protein.
Length = 36
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 187 MARCPQTRPSGVETILSTLSSARPE 261
+A+ P + T+ ST+SSA+PE
Sbjct: 7 VAQLPHHLSPNMPTMDSTVSSAKPE 31
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 252 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 347
E A H+ + D+EPTV RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 533 TQSRYLHRRVEDQESLQTGTLVSELADSVQNQIYD 429
TQS Y V+DQ++ + ++VS + N D
Sbjct: 967 TQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKD 1001
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,892
Number of Sequences: 438
Number of extensions: 5079
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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