Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00534
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 29 3.9
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 29 3.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.9
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 29 3.9
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 29 3.9
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 29 3.9
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 29 3.9
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 29 3.9
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 28 6.7
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +1
Query: 22 KHTVLARKEVILSAGPIASPQLLMLSGVGPKEHLTSMGIPVLKDLP-VGKTLYDHI 186
+ + + +VIL+ G I +PQLLMLSGVGP +HL S IP++ +LP VG+ L DH+
Sbjct: 289 REKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANLPGVGQNLQDHL 344
>Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical
protein C16C10.9 protein.
Length = 274
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 346 SLTIWILYQTSNCSALGDLYLSMVGLEVAKR 438
S TI+ LY+ + C +G +YL +G V R
Sbjct: 116 SSTIYFLYKQATCQRMGPIYLQQLGNVVTLR 146
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/95 (23%), Positives = 40/95 (42%)
Frame = +3
Query: 204 IRTQHNRRQSERKQDAKAKSAIEWIKNGDNVMSSPGGVEGIGYIKTPVSNDLDPIPDIEL 383
I + +SE + K + KN + S G + ++ P S L+P PD+ L
Sbjct: 426 INIEKEVNESEVVVEKKETDVVVENKNDEIQNESVEGEDEYEEVEEPPSTPLNPTPDLIL 485
Query: 384 LSIGGSILVDGGPGGSKAVRKGMRIRDAVIDEAFG 488
+ +V+ A+ K +R ++D+ FG
Sbjct: 486 NDVVSDPIVNQAAAREAALDKEQSLRKRLLDK-FG 519
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/95 (23%), Positives = 40/95 (42%)
Frame = +3
Query: 204 IRTQHNRRQSERKQDAKAKSAIEWIKNGDNVMSSPGGVEGIGYIKTPVSNDLDPIPDIEL 383
I + +SE + K + KN + S G + ++ P S L+P PD+ L
Sbjct: 509 INIEKEVNESEVVVEKKETDVVVENKNDEIQNESVEGEDEYEEVEEPPSTPLNPTPDLIL 568
Query: 384 LSIGGSILVDGGPGGSKAVRKGMRIRDAVIDEAFG 488
+ +V+ A+ K +R ++D+ FG
Sbjct: 569 NDVVSDPIVNQAAAREAALDKEQSLRKRLLDK-FG 602
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 146 RTGIPIEVKCSLGPTPDNISSW---GDAMGPADRITSLRASTVCFNRLRS 6
R G P+++KC + P W GD + P D + + VC R+ S
Sbjct: 1691 RIGEPVQLKCLIAGMPQPEIEWTVDGDPIVPNDEYSIVYEDGVCILRIES 1740
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 423 GGSKAVRKGMRIRDAVIDEAFGSI 494
GG + R+ RI D VIDEAF I
Sbjct: 2838 GGDRGRRRSTRITDQVIDEAFQGI 2861
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 423 GGSKAVRKGMRIRDAVIDEAFGSI 494
GG + R+ RI D VIDEAF I
Sbjct: 2838 GGDRGRRRSTRITDQVIDEAFQGI 2861
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 123 NFNGYTSSQRSTSWQNALRSYFFPRSYIRTQHNRRQSERKQDAKAKSAIEWIKNGDNVMS 302
N N +S+ W + S S+ QH R++ +KQ+A S I + +G + ++
Sbjct: 74 NENITMTSRTDPEWNMTVDSISIQSSFAEYQHRRKERLKKQEAHKTSEIS-LSSGPSELA 132
Query: 303 SPG 311
G
Sbjct: 133 MKG 135
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 123 NFNGYTSSQRSTSWQNALRSYFFPRSYIRTQHNRRQSERKQDAKAKSAIEWIKNGDNVMS 302
N N +S+ W + S S+ QH R++ +KQ+A S I + +G + ++
Sbjct: 74 NENITMTSRTDPEWNMTVDSISIQSSFAEYQHRRKERLKKQEAHKTSEIS-LSSGPSELA 132
Query: 303 SPG 311
G
Sbjct: 133 MKG 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,990,046
Number of Sequences: 27780
Number of extensions: 422945
Number of successful extensions: 1086
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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