Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00531
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.70 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 670 KRHNRMDIQTHKSFCNYVSLKFLCILQISSHFLAKSMHLPTSC 542
           +RH R+        C + S+KF    Q+ +H L  +   P  C
Sbjct: 207 RRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNEKPFEC 249


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 253 YLCKNIVFGVNLAAVNAIPVPLITA-KVNL 167
           Y+  NIVFG+ L     +PV  +T+ K NL
Sbjct: 193 YMPYNIVFGLCLTTFGLLPVNGVTSEKCNL 222


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 223 NLAAVNAIPVPLITAKVNLRPVSVRNQFMGLFIVM-VICRYLSRTINAYKR 74
           N+   N  P+PL+    +L P  + +Q    F+V  +I R     IN+  R
Sbjct: 441 NIPRENIDPIPLVVVLTHLIPFMLIHQGETQFVVANIILRRRFALINSILR 491


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 365 CGEYLTS-SRCPSISHSIVLIHWTILLVFHYCNVEQNLIFM 246
           CGE  ++  RC      I L++W   L+    N   NLIF+
Sbjct: 71  CGEVFSAWVRCQD-QILIFLVNWYPRLIIGIMNSTLNLIFL 110


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 31  IYFANVQLQLGVQWSFYMHLLFSISICI 114
           ++  ++ L + + + +YMHLLF  +  I
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLFCCAFII 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,770
Number of Sequences: 336
Number of extensions: 4067
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)