Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00531
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1969|AAX52703.1|  320|Drosophila melanogaster CG33506-P...    82   1e-15
AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...    29   7.4  
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...    29   7.4  

>AE013599-1969|AAX52703.1|  320|Drosophila melanogaster CG33506-PA
           protein.
          Length = 320

 Score = 81.8 bits (193), Expect = 1e-15
 Identities = 38/89 (42%), Positives = 57/89 (64%)
 Frame = +2

Query: 257 DFVQHYSNGKPVELSNELEQCYEKCLDILKMSDIHRKVISPFSAYGXDLFHAGTTCSRFG 436
           DFVQ Y +G    +   ++Q  EK LD L ++   RK + PF+ +G D+F AGTT  RFG
Sbjct: 52  DFVQCYQHGVGRPVPEAVQQRLEKALDQLGVTPFERKFVKPFTVFGFDVFQAGTTKFRFG 111

Query: 437 VAVGIPINFTYKSIEDLKNSPIQVIKKQL 523
            A+GIP+N+ Y S+E++K + I+   KQ+
Sbjct: 112 GALGIPVNYGYDSLEEIKRADIRFRDKQI 140



 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 141 NWFLTETGRKFTFAVISGTGIALTAARFTPNTIFLHKYK 257
           ++F TE GRK  F     T + L    F P+T  L  Y+
Sbjct: 13  SYFKTEKGRKLVFYAAGATTVGLFLGNFLPHTFGLKYYR 51


>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 370 HISL*CIWP*FISCWNYLFKIWCSCGNSNKFY-IQIY*GS*KLTHTSNQKAVDWSSEVGK 546
           H+    I P  + C N L K   +  N NK Y +Q+   + K++  S   A D+   VGK
Sbjct: 294 HVESKTILPCELPCRNKLGKSIVAARNLNKGYRLQLADMAIKVSEPSGLTAEDFLDLVGK 353

Query: 547 KLAD 558
           +LAD
Sbjct: 354 ELAD 357


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 370 HISL*CIWP*FISCWNYLFKIWCSCGNSNKFY-IQIY*GS*KLTHTSNQKAVDWSSEVGK 546
           H+    I P  + C N L K   +  N NK Y +Q+   + K++  S   A D+   VGK
Sbjct: 294 HVESKTILPCELPCRNKLGKSIVAARNLNKGYRLQLADMAIKVSEPSGLTAEDFLDLVGK 353

Query: 547 KLAD 558
           +LAD
Sbjct: 354 ELAD 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,179,785
Number of Sequences: 53049
Number of extensions: 672114
Number of successful extensions: 2093
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)