Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00530
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089547-1|AAL90285.1|  574|Drosophila melanogaster LD23509p pro...   146   2e-35
AE014298-1351|AAF46510.2|  607|Drosophila melanogaster CG12141-P...   146   2e-35
AE014298-1350|AAN09255.1|  574|Drosophila melanogaster CG12141-P...   146   2e-35

>AY089547-1|AAL90285.1|  574|Drosophila melanogaster LD23509p
           protein.
          Length = 574

 Score =  146 bits (355), Expect = 2e-35
 Identities = 66/87 (75%), Positives = 76/87 (87%)
 Frame = +1

Query: 508 ANAKLYETEDKFFKDTDKLRRGDIIGCVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLH 687
           A+AK Y++E  F  DT KLRRGDIIG VGHPGKTKKGELS++P  IKLL+PCLHMLPHLH
Sbjct: 141 ASAKSYKSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLH 200

Query: 688 FGLKDKETRFRKRYLDLILNDKVRQSF 768
           FGLKDKETR+R+RYLDLILN+ VR+ F
Sbjct: 201 FGLKDKETRYRQRYLDLILNNNVREKF 227



 Score =  120 bits (290), Expect = 2e-27
 Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +2

Query: 257 YYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEKYQN-LNNGDVLENVTLSVAGRV 433
           Y+KLRS AV  LK     D PYPHKF+VS SLE+FI KY+N L  G+ LENV LSVAGRV
Sbjct: 57  YFKLRSAAVQELKRSPATD-PYPHKFHVSSSLEDFIAKYENSLKEGETLENVKLSVAGRV 115

Query: 434 HSIRESGAKLIFYDLRAEGAKIQVMLMQNYMKQKISF 544
           H+IRESGAKLIFYDLR EG K+QVM      K +  F
Sbjct: 116 HAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADF 152


>AE014298-1351|AAF46510.2|  607|Drosophila melanogaster CG12141-PB,
           isoform B protein.
          Length = 607

 Score =  146 bits (355), Expect = 2e-35
 Identities = 66/87 (75%), Positives = 76/87 (87%)
 Frame = +1

Query: 508 ANAKLYETEDKFFKDTDKLRRGDIIGCVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLH 687
           A+AK Y++E  F  DT KLRRGDIIG VGHPGKTKKGELS++P  IKLL+PCLHMLPHLH
Sbjct: 174 ASAKSYKSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLH 233

Query: 688 FGLKDKETRFRKRYLDLILNDKVRQSF 768
           FGLKDKETR+R+RYLDLILN+ VR+ F
Sbjct: 234 FGLKDKETRYRQRYLDLILNNNVREKF 260



 Score =  120 bits (290), Expect = 2e-27
 Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +2

Query: 257 YYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEKYQN-LNNGDVLENVTLSVAGRV 433
           Y+KLRS AV  LK     D PYPHKF+VS SLE+FI KY+N L  G+ LENV LSVAGRV
Sbjct: 90  YFKLRSAAVQELKRSPATD-PYPHKFHVSSSLEDFIAKYENSLKEGETLENVKLSVAGRV 148

Query: 434 HSIRESGAKLIFYDLRAEGAKIQVMLMQNYMKQKISF 544
           H+IRESGAKLIFYDLR EG K+QVM      K +  F
Sbjct: 149 HAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADF 185


>AE014298-1350|AAN09255.1|  574|Drosophila melanogaster CG12141-PA,
           isoform A protein.
          Length = 574

 Score =  146 bits (355), Expect = 2e-35
 Identities = 66/87 (75%), Positives = 76/87 (87%)
 Frame = +1

Query: 508 ANAKLYETEDKFFKDTDKLRRGDIIGCVGHPGKTKKGELSIIPKNIKLLAPCLHMLPHLH 687
           A+AK Y++E  F  DT KLRRGDIIG VGHPGKTKKGELS++P  IKLL+PCLHMLPHLH
Sbjct: 141 ASAKSYKSEADFEIDTSKLRRGDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLH 200

Query: 688 FGLKDKETRFRKRYLDLILNDKVRQSF 768
           FGLKDKETR+R+RYLDLILN+ VR+ F
Sbjct: 201 FGLKDKETRYRQRYLDLILNNNVREKF 227



 Score =  120 bits (290), Expect = 2e-27
 Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +2

Query: 257 YYKLRSGAVAALKNGLKEDHPYPHKFNVSISLEEFIEKYQN-LNNGDVLENVTLSVAGRV 433
           Y+KLRS AV  LK     D PYPHKF+VS SLE+FI KY+N L  G+ LENV LSVAGRV
Sbjct: 57  YFKLRSAAVQELKRSPATD-PYPHKFHVSSSLEDFIAKYENSLKEGETLENVKLSVAGRV 115

Query: 434 HSIRESGAKLIFYDLRAEGAKIQVMLMQNYMKQKISF 544
           H+IRESGAKLIFYDLR EG K+QVM      K +  F
Sbjct: 116 HAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEADF 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,290,679
Number of Sequences: 53049
Number of extensions: 558845
Number of successful extensions: 1172
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)