Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00529
(790 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 168 1e-40
UniRef50_UPI0000D55B00 Cluster: PREDICTED: similar to ADP-ribosy... 43 0.010
UniRef50_UPI00015B5F8D Cluster: PREDICTED: hypothetical protein;... 41 0.041
UniRef50_UPI00006A0DA3 Cluster: UPI00006A0DA3 related cluster; n... 37 0.50
UniRef50_Q9P2R9 Cluster: SRp25 nuclear protein; n=5; Eutheria|Re... 36 1.2
UniRef50_Q8TEM4 Cluster: FLJ00169 protein; n=36; Amniota|Rep: FL... 36 1.2
UniRef50_Q502P0 Cluster: Zgc:111967; n=2; Danio rerio|Rep: Zgc:1... 36 1.5
UniRef50_Q3KPW4 Cluster: LOC733371 protein; n=1; Xenopus laevis|... 36 1.5
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo... 36 1.5
UniRef50_UPI0000E483B1 Cluster: PREDICTED: similar to endonuclea... 35 2.0
UniRef50_UPI000065DF29 Cluster: SRp25 nuclear protein isoform 1;... 34 3.5
UniRef50_Q55XW0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
UniRef50_Q4RT29 Cluster: Chromosome 12 SCAF14999, whole genome s... 33 8.2
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 168 bits (409), Expect = 1e-40
Identities = 78/84 (92%), Positives = 78/84 (92%)
Frame = +3
Query: 510 PLGLRRDFGSLCILYCMFHGECSEELFEMIPASHFYHRTARHRSRVHPYYLEPLRSSTVC 689
PLGLRRDFGSLCILY MFHGECSEELFEMIPAS FYHRTARHRSRVHPYYLEPLRSSTV
Sbjct: 870 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 929
Query: 690 FQRYFLLRTIRLWNELPSTVFTER 761
FQR FL RTIRLWNELPSTVF ER
Sbjct: 930 FQRSFLPRTIRLWNELPSTVFPER 953
>UniRef50_UPI0000D55B00 Cluster: PREDICTED: similar to
ADP-ribosylation factor-like 6 interacting protein 4;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
ADP-ribosylation factor-like 6 interacting protein 4 -
Tribolium castaneum
Length = 169
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 176 KSPEVSADIPVELMEISKAMAPMTKEDGRKNRVLLEEYW 292
KS S+DIPVELM SKAMAPMTKE K + ++ +
Sbjct: 80 KSEVTSSDIPVELMAKSKAMAPMTKEQWEKQQSVVRRVY 118
Score = 40.3 bits (90), Expect = 0.054
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K WEK+QS++RRV DE TGR+RL
Sbjct: 104 KEQWEKQQSVVRRVYDETTGRHRL 127
>UniRef50_UPI00015B5F8D Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 477
Score = 40.7 bits (91), Expect = 0.041
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K+ WEK+Q+++RR+ DEE+GR+RL
Sbjct: 415 KKEWEKRQNVVRRIYDEESGRHRL 438
>UniRef50_UPI00006A0DA3 Cluster: UPI00006A0DA3 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A0DA3 UniRef100 entry -
Xenopus tropicalis
Length = 189
Score = 37.1 bits (82), Expect = 0.50
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 588 FEMIPASHFYHRTARHRSRVHPYYLEPLRSSTVCFQRYFLLRTIRLWNELPSTV 749
+ I HF ++ + R+R HP+ E R Q +F +R ++LWN LP V
Sbjct: 136 YRQIGGVHFSYKNDQ-RARGHPFSPEERRFHLNTQQGFFTVRAVKLWNSLPEVV 188
>UniRef50_Q9P2R9 Cluster: SRp25 nuclear protein; n=5; Eutheria|Rep:
SRp25 nuclear protein - Homo sapiens (Human)
Length = 218
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K W+ +QSIIR+V+D ETGR RL
Sbjct: 155 KEEWDARQSIIRKVVDPETGRTRL 178
>UniRef50_Q8TEM4 Cluster: FLJ00169 protein; n=36; Amniota|Rep:
FLJ00169 protein - Homo sapiens (Human)
Length = 432
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K W+ +QSIIR+V+D ETGR RL
Sbjct: 372 KEEWDARQSIIRKVVDPETGRTRL 395
>UniRef50_Q502P0 Cluster: Zgc:111967; n=2; Danio rerio|Rep:
Zgc:111967 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 221
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K +E +QS+IRRVLD ETGR RL
Sbjct: 158 KEEYEARQSVIRRVLDPETGRTRL 181
>UniRef50_Q3KPW4 Cluster: LOC733371 protein; n=1; Xenopus
laevis|Rep: LOC733371 protein - Xenopus laevis (African
clawed frog)
Length = 281
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K W+ +QS+IR+V+D ETGR RL
Sbjct: 219 KEEWDAQQSVIRKVVDPETGRIRL 242
>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
Bombyx mori (Silk moth)
Length = 92
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -2
Query: 648 ELYSGGGRCDGKNEMPVSSQTI 583
E Y GG RCDGKNE VSSQTI
Sbjct: 4 EFYDGG-RCDGKNETMVSSQTI 24
>UniRef50_UPI0000E483B1 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 483
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 588 FEMIPASHFYHRTARHRSRVHPYYLEPLRSSTVCFQRYFLLRTIRLWNELPSTV 749
F+ + HF+ RT R+R H L L+ + F R I +WN LP V
Sbjct: 397 FDNLQKQHFFSRTKCSRTRGHSLKLYKLKYRKTLRKNSFSQRIINVWNGLPGDV 450
>UniRef50_UPI000065DF29 Cluster: SRp25 nuclear protein isoform 1;
n=1; Takifugu rubripes|Rep: SRp25 nuclear protein
isoform 1 - Takifugu rubripes
Length = 209
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K +E +QS+IRRV+D ETGR RL
Sbjct: 131 KEEYEARQSVIRRVVDPETGRTRL 154
>UniRef50_Q55XW0 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 230
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -3
Query: 302 VSSSNTLLIILCFFSHPLLSSVPWPLRSPSI 210
+S ++ +LIILC FS P + S+ W LR+PS+
Sbjct: 19 LSLASLVLIILCTFSSPFIPSISW-LRNPSL 48
>UniRef50_Q4RT29 Cluster: Chromosome 12 SCAF14999, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF14999, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 259
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
K +E +QS+IR+V+D ETGR RL
Sbjct: 181 KEEYEARQSVIRKVVDPETGRTRL 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,064,936
Number of Sequences: 1657284
Number of extensions: 13042689
Number of successful extensions: 36231
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36229
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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