Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00529
         (790 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like f...    36   0.17 
BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like f...    36   0.17 
BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.      36   0.17 
BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.      36   0.17 
AK074098-1|BAB84924.1|  432|Homo sapiens FLJ00169 protein protein.     36   0.17 
AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein p...    36   0.17 
DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like f...    31   3.6  

>BC094839-1|AAH94839.1|  352|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 352

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 289 KEEWDARQSIIRKVVDPETGRTRL 312


>BC015909-1|AAH15909.2|  360|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 360

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 297 KEEWDARQSIIRKVVDPETGRTRL 320


>BC015569-1|AAH15569.1|  215|Homo sapiens ARL6IP4 protein protein.
          Length = 215

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 155 KEEWDARQSIIRKVVDPETGRTRL 178


>BC001958-1|AAH01958.1|  218|Homo sapiens ARL6IP4 protein protein.
          Length = 218

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 155 KEEWDARQSIIRKVVDPETGRTRL 178


>AK074098-1|BAB84924.1|  432|Homo sapiens FLJ00169 protein protein.
          Length = 432

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 372 KEEWDARQSIIRKVVDPETGRTRL 395


>AB035384-1|BAA94744.1|  218|Homo sapiens SRp25 nuclear protein
           protein.
          Length = 218

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 247 KRGWEKKQSIIRRVLDEETGRYRL 318
           K  W+ +QSIIR+V+D ETGR RL
Sbjct: 155 KEEWDARQSIIRKVVDPETGRTRL 178


>DQ099385-1|AAZ13761.1|  181|Homo sapiens ADP-ribosylation-like
           factor 6 interacting protein 4 protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 3/27 (11%)
 Frame = +1

Query: 247 KRGWEK---KQSIIRRVLDEETGRYRL 318
           K+G EK   +QSIIR+V+D ETGR RL
Sbjct: 115 KKGKEKAEAQQSIIRKVVDPETGRTRL 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,941,484
Number of Sequences: 237096
Number of extensions: 2035188
Number of successful extensions: 5004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5004
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)