Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00529
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p pro...    31   2.4  
AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-P...    31   2.4  
BT022686-1|AAY55102.1|   78|Drosophila melanogaster IP07169p pro...    29   9.6  
AE014297-3458|AAF56235.2|  144|Drosophila melanogaster CG18428-P...    29   9.6  

>AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p
           protein.
          Length = 1710

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 609 EMPVSSQTIPQSTLHGTYSTKYRGNRSPS 523
           E PVSS ++P ++ H  Y  +  G RSPS
Sbjct: 391 EFPVSSSSMPNASDHYDYEDELTGGRSPS 419


>AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-PA
           protein.
          Length = 1710

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 609 EMPVSSQTIPQSTLHGTYSTKYRGNRSPS 523
           E PVSS ++P ++ H  Y  +  G RSPS
Sbjct: 391 EFPVSSSSMPNASDHYDYEDELTGGRSPS 419


>BT022686-1|AAY55102.1|   78|Drosophila melanogaster IP07169p
           protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 226 KGHGTDDKRGWEKKQSIIRRVLDEETGRYRL 318
           K H  +    ++++QS IR+ +D  TGR RL
Sbjct: 4   KSHAPETPEEYQRRQSQIRKEVDPVTGRVRL 34


>AE014297-3458|AAF56235.2|  144|Drosophila melanogaster CG18428-PA
           protein.
          Length = 144

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 226 KGHGTDDKRGWEKKQSIIRRVLDEETGRYRL 318
           K H  +    ++++QS IR+ +D  TGR RL
Sbjct: 70  KSHAPETPEEYQRRQSQIRKEVDPVTGRVRL 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,393,812
Number of Sequences: 53049
Number of extensions: 613013
Number of successful extensions: 1797
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)