Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00528
         (505 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P31265 Cluster: Translationally-controlled tumor protei...    35   0.91 
UniRef50_Q4BVU7 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_A6L309 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q64760 Cluster: Late 100 kDa protein; n=3; Aviadenoviru...    32   6.4  

>UniRef50_P31265 Cluster: Translationally-controlled tumor protein
           homolog; n=33; Spermatophyta|Rep:
           Translationally-controlled tumor protein homolog -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 168

 Score = 35.1 bits (77), Expect = 0.91
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +3

Query: 129 NPNPEETSETKSVEDFNVAANAMVETEAITPEPTYDKENVVAIFTLKNPKIFSLKFHLNT 308
           NP+ EE  E + V+D       +V+T  +  +PTYDK+  +A +  K  K+ + K     
Sbjct: 48  NPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIA-YIKKYIKLLTPKLSEED 106

Query: 309 QCPLK 323
           Q   K
Sbjct: 107 QAVFK 111


>UniRef50_Q4BVU7 Cluster: Putative uncharacterized protein; n=1;
           Crocosphaera watsonii WH 8501|Rep: Putative
           uncharacterized protein - Crocosphaera watsonii
          Length = 81

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 376 SFTSASCITSSDPKPKFRRASKQQDFFSGKRI 471
           S+TS +    +DP P +++  K Q  FSGKR+
Sbjct: 19  SYTSKASFLDNDPLPVYQKGQKNQVIFSGKRV 50


>UniRef50_A6L309 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 302

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +3

Query: 126 NNPNPEETSETKSVEDFNVAANAMVETEAITPEPTYDKENVVAIFTLKNPKI 281
           NNP P++T E  S +DF++  +A   T   +  P+Y    V+ I T  N +I
Sbjct: 12  NNPKPQDTKEGLSDQDFSIYMDA--HTVPFSKYPSYMPAGVLGICTEGNAEI 61


>UniRef50_Q64760 Cluster: Late 100 kDa protein; n=3;
           Aviadenovirus|Rep: Late 100 kDa protein - Avian
           adenovirus gal1 (strain Phelps) (FAdV-1) (Fowl
           adenovirus 1)
          Length = 984

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 126 NNPNPEETSETKSVEDFNVAANAMVETEAITPEPTYD 236
           +NP PE   E+ +VED  VAA +    +   PEP YD
Sbjct: 115 SNPEPESI-ESDAVEDLGVAAESDPSDDEPDPEPEYD 150


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,483,297
Number of Sequences: 1657284
Number of extensions: 7076737
Number of successful extensions: 19975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19969
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)