Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00528
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.         31   0.89 
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...    31   0.89 
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,...    31   0.89 
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,...    31   0.89 
AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-P...    30   2.0  
BT029080-1|ABJ17013.1|  484|Drosophila melanogaster IP10471p pro...    29   3.6  
AE014297-3251|AAF56080.2|  209|Drosophila melanogaster CG13834-P...    29   3.6  

>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
          Length = 1893

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 129  NPNPEETSETKSVE-DFNVAANAMVETEAITPEPTYDKENVVAIFTL 266
            +P  EE  +T  +E DF   A  + E E    E  YDKENV  +F L
Sbjct: 1459 SPMQEEQLKTLILERDFERRAQELQEQEEQDQEQQYDKENVQELFRL 1505


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
          Length = 2051

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 129  NPNPEETSETKSVE-DFNVAANAMVETEAITPEPTYDKENVVAIFTL 266
            +P  EE  +T  +E DF   A  + E E    E  YDKENV  +F L
Sbjct: 1617 SPMQEEQLKTLILERDFERRAQELQEQEEQDQEQQYDKENVQELFRL 1663


>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
            isoform A protein.
          Length = 2051

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 129  NPNPEETSETKSVE-DFNVAANAMVETEAITPEPTYDKENVVAIFTL 266
            +P  EE  +T  +E DF   A  + E E    E  YDKENV  +F L
Sbjct: 1617 SPMQEEQLKTLILERDFERRAQELQEQEEQDQEQQYDKENVQELFRL 1663


>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
            isoform B protein.
          Length = 1882

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 129  NPNPEETSETKSVE-DFNVAANAMVETEAITPEPTYDKENVVAIFTL 266
            +P  EE  +T  +E DF   A  + E E    E  YDKENV  +F L
Sbjct: 1448 SPMQEEQLKTLILERDFERRAQELQEQEEQDQEQQYDKENVQELFRL 1494


>AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-PA
           protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 414 KTKISTSFKTTGFLLRQKNSNYL 482
           + +I+ +FK  GFL+R +NS+YL
Sbjct: 9   RKRITNTFKLCGFLIRSENSSYL 31


>BT029080-1|ABJ17013.1|  484|Drosophila melanogaster IP10471p
           protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 272 VLQCEYCNNVFFVIGWFRCNGFSF-NHCVSRYIK 174
           +L+C  C  V    GW  CNG    N+C SR +K
Sbjct: 43  LLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVK 76


>AE014297-3251|AAF56080.2|  209|Drosophila melanogaster CG13834-PA
           protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 272 VLQCEYCNNVFFVIGWFRCNGFSF-NHCVSRYIK 174
           +L+C  C  V    GW  CNG    N+C SR +K
Sbjct: 127 LLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVK 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,890,023
Number of Sequences: 53049
Number of extensions: 336491
Number of successful extensions: 989
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)