Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00524
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB076 Cluster: hypothetical protein TTHERM_0024...    33   3.6  
UniRef50_Q4SPY3 Cluster: Chromosome 7 SCAF14536, whole genome sh...    32   8.2  
UniRef50_Q7RSC7 Cluster: N-acetylglucosamine-1-phosphate transfe...    32   8.2  

>UniRef50_UPI00006CB076 Cluster: hypothetical protein
           TTHERM_00241710; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00241710 - Tetrahymena
           thermophila SB210
          Length = 836

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 372 KVTHCLSNYKKLISKHLWTFKGTLFLFNLHN 280
           K+ H ++N   L S+  W FKG+ F FNL N
Sbjct: 197 KIIHGINNLNLLFSQVFWLFKGSNFYFNLIN 227


>UniRef50_Q4SPY3 Cluster: Chromosome 7 SCAF14536, whole genome
           shotgun sequence; n=5; Clupeocephala|Rep: Chromosome 7
           SCAF14536, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 126

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 504 FHHVLTTKYGMCLIVLLLSVYCVPPLNSVM 415
           F  +++ +YG CL + LL + C+PP+   M
Sbjct: 46  FACIISKRYGQCLCLPLLDIGCIPPITLAM 75


>UniRef50_Q7RSC7 Cluster: N-acetylglucosamine-1-phosphate
           transferase; n=3; Plasmodium (Vinckeia)|Rep:
           N-acetylglucosamine-1-phosphate transferase - Plasmodium
           yoelii yoelii
          Length = 445

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = -3

Query: 537 MIHRYNIQAYVFHHVLTTKYGMCLIVLLLSVYCVPPLNSVMEKE*K*VFVLCTIQKVTHC 358
           +I  Y ++  ++ +++    G C+++  LS  C+P     + ++   +++   + K   C
Sbjct: 36  LIVLYVLRDTIYKNIIIFYIGPCVLLFKLSFICIPKFIQFLNQKGNNIYICICMYKYV-C 94

Query: 357 LSNYKKLI-SKHLWTFKGTLFLFNLHNSSIF 268
           +  YK  +   HL+ +  TL+ F +H  + F
Sbjct: 95  IYIYKDCVYFIHLY-YISTLYAFIIHLYTTF 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,096,261
Number of Sequences: 1657284
Number of extensions: 9500227
Number of successful extensions: 18202
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18200
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)