Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00524
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.4  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 496 MVKNICLYIVPMYHLYNKNNAVT 564
           +VKN   Y   +YHL +K+N ++
Sbjct: 279 IVKNCLSYCFNLYHLASKSNQLS 301


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 496 MVKNICLYIVPMYHLYNKNNAVT 564
           +VKN   Y   +YHL +K+N ++
Sbjct: 279 IVKNCLSYCFNLYHLASKSNQLS 301


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -2

Query: 334 FETSLDFQRHAFSI*SSQFINL*LITAQNYLMIINALVFMSFNKTEVVFL 185
           F T+ + +   F +      N+  ITA NY  I  A +   F  T   F+
Sbjct: 319 FVTNSEVRTELFKLAQHVSANIVHITAGNYFEINKATLCGIFGTTTTYFI 368


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -2

Query: 334 FETSLDFQRHAFSI*SSQFINL*LITAQNYLMIINALVFMSFNKTEVVFL 185
           F T+ + +   F +      N+  ITA NY  I  A +   F  T   F+
Sbjct: 319 FVTNSEVRTELFKLAQHVSANIVHITAGNYFEINKATLCGIFGTTTTYFI 368


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/12 (50%), Positives = 6/12 (50%)
 Frame = -2

Query: 496  CPYN*IWNVSHC 461
            CP    WN  HC
Sbjct: 2265 CPNGLFWNKDHC 2276


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 416 WKRNKNRFLCFAL 378
           +KR+K R LC+ L
Sbjct: 126 YKRHKKRLLCYLL 138



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 126 NNYCHTEFYVRLIFSRFQLFKKTTSVLLKLMNTKAFIII 242
           NNY     Y+R+ F+ F +     +  L LM    F+ +
Sbjct: 517 NNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKNRFVTL 555


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 364 CNFLYSAKHKNLFLFL 411
           C FLY+  H  L L +
Sbjct: 142 CQFLYNCFHSTLLLMI 157


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 416 WKRNKNRFLCFAL 378
           +KR+K R LC+ L
Sbjct: 144 YKRHKKRLLCYLL 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,997
Number of Sequences: 336
Number of extensions: 2933
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)