Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00524
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001443-1|AAN71198.1|  662|Drosophila melanogaster GH25957p pro...    29   4.4  
AE014298-530|AAF45873.3|  682|Drosophila melanogaster CG10804-PA...    29   4.4  
AE014298-529|AAN09096.1|  662|Drosophila melanogaster CG10804-PB...    29   4.4  

>BT001443-1|AAN71198.1|  662|Drosophila melanogaster GH25957p
           protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 144 PCDNNCYNTCGLVR*LPLYLAMEGGVKRFSILNEEIRRTVSSCSKQK 4
           P +NNCY    LV       +M  GV  FS++  +   T   C++++
Sbjct: 319 PANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEER 365


>AE014298-530|AAF45873.3|  682|Drosophila melanogaster CG10804-PA,
           isoform A protein.
          Length = 682

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 144 PCDNNCYNTCGLVR*LPLYLAMEGGVKRFSILNEEIRRTVSSCSKQK 4
           P +NNCY    LV       +M  GV  FS++  +   T   C++++
Sbjct: 319 PANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEER 365


>AE014298-529|AAN09096.1|  662|Drosophila melanogaster CG10804-PB,
           isoform B protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 144 PCDNNCYNTCGLVR*LPLYLAMEGGVKRFSILNEEIRRTVSSCSKQK 4
           P +NNCY    LV       +M  GV  FS++  +   T   C++++
Sbjct: 319 PANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEER 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,391,039
Number of Sequences: 53049
Number of extensions: 443151
Number of successful extensions: 883
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)