Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00524
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   6.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   6.5  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   6.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   6.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   8.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 282 CED*IEKACL*KSKDVSKLVFYSWID 359
           C +  E  CL  + D SK   Y W D
Sbjct: 133 CGERTEGRCLHYTVDKSKPKVYQWFD 158


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 282 CED*IEKACL*KSKDVSKLVFYSWID 359
           C +  E  CL  + D SK   Y W D
Sbjct: 138 CGERTEGRCLHYTVDKSKPKVYQWFD 163


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 293 LIFTIHQSLINHSPKLSYDYKRF 225
           L+FTI    +  SP+  Y++ ++
Sbjct: 131 LLFTIELDRVLESPRGKYEFSKY 153


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 293 LIFTIHQSLINHSPKLSYDYKRF 225
           L+FTI    +  SP+  Y++ ++
Sbjct: 146 LLFTIELDRVLESPRGKYEFSKY 168


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 150 YVRLIFSRFQLFKKTTSVL 206
           Y+ LIF++FQ F ++  +L
Sbjct: 181 YIFLIFNQFQDFSESFQIL 199


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 150 YVRLIFSRFQLFKKTTSVL 206
           Y+ LIF++FQ F ++  +L
Sbjct: 181 YIFLIFNQFQDFSESFQIL 199


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 150 YVRLIFSRFQLFKKTTSVL 206
           Y+ LIF++FQ F ++  +L
Sbjct: 181 YIFLIFNQFQDFSESFQIL 199


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 282 CED*IEKACL*KSKDVSKLVFYSWID 359
           C +  E  CL  + D SK   Y W D
Sbjct: 138 CGERTEGRCLHYTVDKSKPKVYQWFD 163


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 KKLISKHLWTFKGTLFL 295
           K ++ K LW +K  +FL
Sbjct: 75  KNVVQKFLWWYKQGMFL 91


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 KKLISKHLWTFKGTLFL 295
           K ++ K LW +K  +FL
Sbjct: 75  KNVVQKFLWWYKQGMFL 91


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 353 DRQCVTFCIVQSTKTY 400
           D QC T CI++  +T+
Sbjct: 64  DLQCYTTCIMKLLRTF 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,092
Number of Sequences: 438
Number of extensions: 3215
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)