Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00522
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.35 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 474 SQYQASGDEERFTSMMSCQQNICSTSRDF-TFTHNYCMSYNSYKSINVSTKI 322
           SQ +A GDE+RF+   S  Q++   S D    +   C+S ++ K +    K+
Sbjct: 37  SQSEA-GDEDRFSFTSSMVQSLDGNSSDLENSSEENCVSMSNLKKLKFLLKL 87


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 313 LNLLFSECNPVRSQWAKSDNAVV 245
           +NL+F+ C  V S W +  + ++
Sbjct: 64  VNLIFNTCGEVFSAWVRCQDQIL 86


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/28 (25%), Positives = 12/28 (42%)
 Frame = +1

Query: 214 RHCIFNMRFCEQLHCHFSPIASEPDYIL 297
           R C +  ++C  L  H       P+ +L
Sbjct: 290 RDCSYATKYCHSLKIHLRRYGHTPNVVL 317


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/44 (20%), Positives = 18/44 (40%)
 Frame = +2

Query: 581 KSIIQNPSEAQRKEHEKQHLKSMKCMLWMF*YPLVKQLDVKWTP 712
           K I++ P +    E     ++    +LW    P+++     W P
Sbjct: 448 KDILEKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSAWNP 491


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -3

Query: 198 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 76
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -3

Query: 198 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 76
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -3

Query: 198 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 76
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,459
Number of Sequences: 336
Number of extensions: 3786
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)