Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00519
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 626 ISKKKKPRKFVEVNTNYKLRKNRPSPK 706
           I KKK+ ++ +E   ++K +KN  S K
Sbjct: 211 IPKKKEVKEEIEDEPDHKWKKNDSSKK 237


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 381 FICYCRFTFH*LMSLNINMH 440
           ++ +C F FH ++ +N+ +H
Sbjct: 667 WLFHCHFLFHIVIGMNLIIH 686


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 451 VRKFVHFKRKC*FRFYEYCSFISS 522
           +R F  +K KC  +   YCS  +S
Sbjct: 465 LRDFQEWKEKCDIKGQPYCSLPNS 488


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 451 VRKFVHFKRKC*FRFYEYCSFISS 522
           +R F  +K KC  +   YCS  +S
Sbjct: 472 LRDFQEWKEKCDIKGQPYCSLPNS 495


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 285 DYVFTYLHLFSTFFLPQVSTISRKVL 208
           +Y F Y+ L+S F L  +   + K+L
Sbjct: 132 EYAFEYIQLYSQFILYFLLFATLKIL 157


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 257 FQPFFCPRFLRYRERFYAVIVNRAMTPPF*FTGF 156
           F   FC     Y+     +++N+ +TP F F  F
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQLITPLFFFHSF 103


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 285 DYVFTYLHLFSTFFLPQVSTISRKVL 208
           +Y F Y+ L+S F L  +   + K+L
Sbjct: 132 EYAFEYIQLYSQFILYFLLFATLKIL 157


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 285 DYVFTYLHLFSTFFLPQVSTISRKVL 208
           +Y F Y+ L+S F L  +   + K+L
Sbjct: 452 EYAFEYIQLYSQFILYFLLFATLKIL 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,325
Number of Sequences: 336
Number of extensions: 3467
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)