Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00519
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0475 + 9724676-9724936,9725518-9726216,9726273-9726596,972...    29   4.0  
06_03_0434 + 20725996-20726026,20726300-20726947,20727168-207272...    29   4.0  

>09_02_0475 +
           9724676-9724936,9725518-9726216,9726273-9726596,
           9726900-9727847
          Length = 743

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -3

Query: 216 KVLRSNRQPGDDSAILIYGILGLLKSTLLSFHYQEKEQG 100
           K L S   P D S + I G+ GL K++L    +++KE+G
Sbjct: 130 KDLLSQSNPDDLSILPIVGLPGLGKTSLARLVFEDKEEG 168


>06_03_0434 +
           20725996-20726026,20726300-20726947,20727168-20727230,
           20727300-20727458,20727750-20728247,20729068-20729321,
           20729448-20729829,20729938-20730204,20730530-20730789
          Length = 853

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 635 KKKPRKFVEVNTNYKLRKNRPSPKS 709
           K+K  K  +VN NY LR+N PS  S
Sbjct: 125 KEKQAKIDKVNANYALRRNTPSEYS 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,985
Number of Sequences: 37544
Number of extensions: 278780
Number of successful extensions: 481
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)