Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00517
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 78 3e-13
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 66 7e-10
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 62 2e-08
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 59 1e-07
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 56 1e-06
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 56 1e-06
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 54 3e-06
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 4e-06
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 52 1e-05
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 51 4e-05
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 51 4e-05
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 50 6e-05
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 49 1e-04
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 48 2e-04
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 47 4e-04
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 43 0.007
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 43 0.007
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 42 0.022
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 39 0.12
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.16
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 36 1.1
UniRef50_Q47VA1 Cluster: Voltage-gated chloride channel; n=1; Co... 33 5.8
UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=... 33 5.8
UniRef50_P48740 Cluster: Complement-activating component of Ra-r... 33 5.8
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 77.8 bits (183), Expect = 3e-13
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Frame = +1
Query: 148 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKLRP*LHVLQLG--RYVL*CDAQL 321
N M+ HFHKDWQR V TWFNQPAR+ RR++ R K R G R ++ C
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 322 FGTILKYA---PVEDSLFVKLGPQIEPSICPNDWNCCRSP*TQQVC*IIANQCSKNKGIQ 492
+ T ++ +E+ + ++ +I + R+ T+ + AN + K +
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTES---LQAN-VQRLKEYR 121
Query: 493 SASYTVP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDERTSK 657
S P K KG+++ EE KLATQL GP+MPV+ K AR ITE+E+ K
Sbjct: 122 SKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFK 177
Score = 74.1 bits (174), Expect = 3e-12
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +2
Query: 401 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAKRC*RVRPMKKNVSWLHSYV 580
ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LIL + + L + +
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 581 VH*CQ--FXXXXXXXXXXXXXKMKELQSLSYLRGARSIAKLVGIRAKRLKDAAENPDDVT 754
+ K ++ + LR AR+ A+L GIRAKR K+AAE DV
Sbjct: 151 TGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVE 208
Query: 755 K 757
K
Sbjct: 209 K 209
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
+RPIVRCPTVRYHTKVRAGRGF+L E+R A
Sbjct: 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVA 84
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1
Query: 136 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKLR 264
M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R KK R
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALRAKKSR 43
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 398 FARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAK 523
+AR+ G+AVDPRRRN+ ES+ N+QR+ EY++RLI +K
Sbjct: 88 YARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSK 129
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+V CP+ RY +KVRAGRGFT +E++ A
Sbjct: 53 LRPLVHCPSERYKSKVRAGRGFTFQELKQA 82
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = +1
Query: 157 IPNGHFHKDWQRFVKTWFNQPARRYRR--KQNRIKKLRP 267
+PN HFHKDWQR+VKTWFNQP R+ RR +Q + K+ P
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQARQTKAAKIAP 50
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 142 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKK 258
K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R KK
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKK 40
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +2
Query: 401 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAKR 526
A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L++ + R
Sbjct: 89 APTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSR 130
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+V T++Y+ KVRAG+GFTL E++ A
Sbjct: 53 LRPVVHGQTLKYNMKVRAGKGFTLEELKVA 82
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
+RPIVRCPTVRYHTKVR GRGF+L EIR A
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLA 42
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +2
Query: 386 LNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRK 517
L +AR++GI VD RRRNKS ESL++NV+RIK Y+ARL++ K
Sbjct: 85 LGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPK 128
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP VRCPT+RY+TK+R+GRGFT+ E++AA
Sbjct: 54 LRPAVRCPTLRYNTKIRSGRGFTIEEVKAA 83
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 142 KGNNMIPNGHFHKDWQRFVKTWFNQP-ARRYRRKQNRIKKLRP*LHVLQLGRYVL*CDAQ 318
K NN++ N HF KDWQR VK WF+QP A++ RR K + L +QL R + C
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAREAKAAKLGLRPVQLLRPAVRCPTL 63
Query: 319 LFGTILK 339
+ T ++
Sbjct: 64 RYNTKIR 70
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 56.0 bits (129), Expect = 1e-06
Identities = 39/115 (33%), Positives = 60/115 (52%)
Frame = +2
Query: 392 PVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAKRC*RVRPMKKNVSWLH 571
P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++ K + V ++ V
Sbjct: 87 PKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQ-VDVSA 145
Query: 572 SYVVH*CQFXXXXXXXXXXXXXKMKELQSLSYLRGARSIAKLVGIRAKRLKDAAE 736
++ V ++ E + LR AR+ K GIR KR K+ AE
Sbjct: 146 TFPVE------QPAPESGLRAVEVPEQTAYRTLRLARNEKKYKGIREKRAKEKAE 194
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRA 380
LRP+VR PTV+Y+ KVRAGRGFTL E++A
Sbjct: 54 LRPVVRAPTVKYNRKVRAGRGFTLAELKA 82
Score = 36.3 bits (80), Expect = 0.83
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 163 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIKK 258
N HF K WQ V+ F+Q ++ R+Q+R++K
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRK 42
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2
Query: 386 LNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL 508
+ P +ARTIGI VD RR+NKS E + INVQR+K Y ++L+L
Sbjct: 101 VKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVL 141
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP V CPTVRY+ K R GRGF+L E++AA
Sbjct: 70 LRPQVNCPTVRYNMKRRLGRGFSLEELKAA 99
Score = 40.3 bits (90), Expect = 0.051
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +1
Query: 136 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIKKLR 264
M KGNN IP+ H K W VK +FNQPA++ RR++ R+ K +
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAK 60
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 148 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 237
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 52.4 bits (120), Expect = 1e-05
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +1
Query: 148 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIK 255
NN+IPN H+HK+++R++KTW+NQP R+ R+ R K
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIARQK 39
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 386 LNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILS-RKAKR 526
+N A +IGIAVD RR + S E+ QINV R+K+Y ++L RK K+
Sbjct: 83 INKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKK 130
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRA 380
LRPIV PT RY+ K R GRGFTL E+ A
Sbjct: 52 LRPIVHPPTQRYNMKTRLGRGFTLEELSA 80
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 386 LNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL 508
LN FART+GI+VD RRRN + E L NV+R+K Y ++L+L
Sbjct: 83 LNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVL 123
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 142 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNR 249
K N +PN H K W RFVKT++NQPA + RR+ R
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAKRRRQLRR 37
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+VR T++Y++ + GRGF+L E++ A
Sbjct: 52 LRPVVRGQTIKYNSVQKLGRGFSLIELKEA 81
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+VRCPTV+Y+ +VR GRGFTL E++ A
Sbjct: 71 LRPVVRCPTVKYNRRVRVGRGFTLAELKEA 100
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 401 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL 508
ART+GIAVD RR N S ESL NV R+K+Y+ARLIL
Sbjct: 107 ARTVGIAVDHRRVNYSKESLVANVARLKDYKARLIL 142
Score = 43.6 bits (98), Expect = 0.005
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 172 FHKDWQRFVKTWFNQPARRYRRKQNRIKK 258
FHKDWQR V+ F+QP R++RR++ R+ K
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAK 59
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRPIVRCPTVRY+ K R GRGFT +E+ AA
Sbjct: 75 LRPIVRCPTVRYNMKTRLGRGFTPKELVAA 104
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1
Query: 130 VKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQN---RIKKLRP 267
++M NN IPN H K W VKT+F+ PAR RR+ R KK+ P
Sbjct: 20 LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAP 68
Score = 39.5 bits (88), Expect = 0.089
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 389 NPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAK 523
+P AR GIAVD RR + ++ NV+R++ Y+ARLI +K +
Sbjct: 107 DPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGE 151
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAD*TQYLPERLELL*IPVDATSLLNHCKSMF 473
L P+V CPT RY+ K R G+GFTL EI+A T P + I VD N C+
Sbjct: 53 LHPVVHCPTQRYNYKTRLGKGFTLEEIKAVKLT---PSAARSIGIIVDKRR-KNRCEESL 108
Query: 474 KE*RNTERV 500
KE N ER+
Sbjct: 109 KE--NAERL 115
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 383 RLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL 508
+L P AR+IGI VD RR+N+ ESL+ N +R+++Y L++
Sbjct: 83 KLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLVM 124
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1
Query: 148 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKK 258
NN++PN H HK WQR+V+ FN+ +R +R+ R K+
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLREKR 41
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 401 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAK 523
AR++G+AVD RR NK ESL +NV R+K Y ++L+L + K
Sbjct: 89 ARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKK 129
Score = 41.1 bits (92), Expect = 0.029
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+V P+ RY+ K+R GRGFTL+E++ A
Sbjct: 53 LRPLVHMPSRRYNYKLRFGRGFTLQELKVA 82
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +2
Query: 383 RLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAKRC*RVRPMKK 553
+++ ARTIGIAVDPRR+ S E L N QR+ EY RL L + + R + K
Sbjct: 82 KIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKIVLTRDVSK 138
Score = 39.1 bits (87), Expect = 0.12
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
L+P V C R++ K+R GRGF+L+E+RAA
Sbjct: 52 LKPSVHCMNQRFNYKLRLGRGFSLKELRAA 81
Score = 38.7 bits (86), Expect = 0.16
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 172 FHKDWQRFVKTWFNQPARRYRRKQNRIKKLR 264
F KDW+ V TW QP R+ RR Q R++K +
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAK 42
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 165 WTFPQGLAKIC*NLV*PASSTIXXXXXXXXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVR 344
W+ + LA++C ++V PA LRP+V T++Y+ KV
Sbjct: 9 WSLQKALAELCQDMVQPACQENQKKNCEEKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVS 68
Query: 345 AGRGFTLREIRAA 383
+GFTL E++AA
Sbjct: 69 TXKGFTLEELKAA 81
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRPIVRCPT++Y+ R GRGFT E A
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKA 80
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 401 ARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILSRKAK 523
AR +GIAVD RRR+ + E+ NV+RIK Y ++ + K
Sbjct: 87 ARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGKITIYESVK 127
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 41.5 bits (93), Expect = 0.022
Identities = 14/28 (50%), Positives = 25/28 (89%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIR 377
L+P+V+CPT ++TK++ GRGF+++EI+
Sbjct: 54 LKPLVKCPTRMHNTKIKLGRGFSIQEIK 81
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 166 GHFHKDWQRFVKTWFNQPARRYRRKQNRIKK 258
GHF K W+ V T FNQP + +R++ R K
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNK 40
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -3
Query: 370 SRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 272
S V P P R L YR VG TIGR+ PA GRG
Sbjct: 411 SSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.16
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 300 PIVRCPTVRYHTKVRAGRGFTLREIR 377
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 505 TVPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDERTS 654
TVPKGKK K A EEE +A Q+ P+ PV K V ++E+++ S
Sbjct: 295 TVPKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPS 342
>UniRef50_Q47VA1 Cluster: Voltage-gated chloride channel; n=1;
Colwellia psychrerythraea 34H|Rep: Voltage-gated
chloride channel - Colwellia psychrerythraea (strain 34H
/ ATCC BAA-681) (Vibriopsychroerythus)
Length = 574
Score = 33.5 bits (73), Expect = 5.8
Identities = 12/37 (32%), Positives = 27/37 (72%)
Frame = -1
Query: 255 FYSILLSAVSSSWLVKPSFNKSLPILVEMSIRYHIIP 145
++S++L A+ ++ +FNK L ++++ S++YHI+P
Sbjct: 232 YFSLILLAIVLG-ILAAAFNKYLVVIIKKSVKYHIVP 267
>UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=2;
Culicidae|Rep: Mixed-lineage leukemia protein, mll -
Aedes aegypti (Yellowfever mosquito)
Length = 2874
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 517 GKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPIT-EDERTSKLIIP 669
G +V+K E+NEE++ + + P++P+ P P + + I+ +R+ LI P
Sbjct: 2020 GLRVIKEESNEEDQTMIFKRMSPIIPIVAPIPIRLKKGISLSSDRSLSLIGP 2071
>UniRef50_P48740 Cluster: Complement-activating component of
Ra-reactive factor precursor (EC 3.4.21.-) (Ra-reactive
factor serine protease p100) (RaRF) (Mannan-binding
lectin serine protease 1) (Mannose-binding protein-
associated serine protease) (MASP-1) (Serine protease 5)
[Contains: Complement-activating component of
Ra-reactive factor heavy chain; Complement-activating
component of Ra-reactive factor light chain]; n=72;
Gnathostomata|Rep: Complement-activating component of
Ra-reactive factor precursor (EC 3.4.21.-) (Ra-reactive
factor serine protease p100) (RaRF) (Mannan-binding
lectin serine protease 1) (Mannose-binding protein-
associated serine protease) (MASP-1) (Serine protease 5)
[Contains: Complement-activating component of
Ra-reactive factor heavy chain; Complement-activating
component of Ra-reactive factor light chain] - Homo
sapiens (Human)
Length = 699
Score = 33.5 bits (73), Expect = 5.8
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -2
Query: 509 TV*DALCIPLFFEH*FAMIQQTCCVYGDLQQFQSFGQILGSICGPNFTKSESSTGAYFSM 330
TV D I L+F H F + C Y D + ++ Q+L + CG T +E + G +
Sbjct: 51 TVPDGFRIKLYFMH-FNLESSYLCEY-DYVKVETEDQVLATFCGRETTDTEQTPGQEVVL 108
Query: 329 VPNSWAS 309
P S+ S
Sbjct: 109 SPGSFMS 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,701,538
Number of Sequences: 1657284
Number of extensions: 13801042
Number of successful extensions: 35504
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 34400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35497
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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