Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00517
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    25   0.66 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 454 IIANQCSKNKGIQSASYTVPKGKKVLKG 537
           IIA Q +++  + S  YTVP G  V+ G
Sbjct: 64  IIARQLNQDLKLASGDYTVPAGCTVVIG 91


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 310 DAQLFGTILKYAPVEDSLFVKLGPQIEPSICPN 408
           D Q  GTI    P + ++F++ G   + S+CP+
Sbjct: 217 DNQCSGTIDWALPNKRTVFIRKGGTAKASMCPS 249


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 604 PAPKSVARPITEDERTSKLIIP 669
           PAP+S A PI+    TS    P
Sbjct: 13  PAPQSAATPISSSGMTSPAAAP 34


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 98  YFCAVLGKTPTSKW 139
           +FC  LG  P  KW
Sbjct: 313 HFCRTLGSLPPFKW 326


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 169  HFHKDWQRFVKTWFN 213
            H H DW     TW++
Sbjct: 1030 HMHPDWTTKPSTWWS 1044



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 424  YSNSNRSGKYWVQSAALISRRVNPLP 347
            Y N+N S  YW++  A   + V  +P
Sbjct: 2539 YFNANFSLNYWIEKGADPGKIVMGMP 2564


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,162
Number of Sequences: 336
Number of extensions: 3475
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)