Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00517
(762 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77926-1|CAA54898.1| 218|Drosophila melanogaster BBC1 protein p... 95 1e-19
AE014134-1746|ABC65888.1| 218|Drosophila melanogaster CG4651-PB... 95 1e-19
AE014134-1745|AAF52842.1| 218|Drosophila melanogaster CG4651-PA... 95 1e-19
AY118310-1|AAM48339.1| 792|Drosophila melanogaster GH14382p pro... 29 9.2
AE014296-1178|AAO41273.1| 778|Drosophila melanogaster CG33171-P... 29 9.2
AE014296-1177|AAO41274.2| 792|Drosophila melanogaster CG33171-P... 29 9.2
>X77926-1|CAA54898.1| 218|Drosophila melanogaster BBC1 protein
protein.
Length = 218
Score = 94.7 bits (225), Expect = 1e-19
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Frame = +1
Query: 136 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKLRP*LHVLQLG--RYVL*C 309
MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR NR+KK + G R V+ C
Sbjct: 1 MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60
Query: 310 DAQLFGTILKYAPVEDSLFVKLGPQIEPSICPNDWNCCRSP*TQQVC*IIANQCSKNKGI 489
+ T L+ A +L G I + + + K
Sbjct: 61 PTIRYHTKLR-AGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119
Query: 490 QSASYTVPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPAPKSVA-RPITEDERTSK 657
+S P +K ++ GE++ EE KLATQL+GP++P++ P V R +T+DE+ K
Sbjct: 120 RSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFK 177
Score = 74.1 bits (174), Expect = 2e-13
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +2
Query: 377 GRRLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL---SRKAKRC*RVRPM 547
G + FA+TIGIAVD RR+NKS+ES Q N+QR+KEYR++LIL + K R
Sbjct: 82 GAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLE 141
Query: 548 KKNVSWLHSYVVH*CQFXXXXXXXXXXXXXKMKELQSLSYLRGARSIAKLVGIRAKRLKD 727
+ ++ V + K+ ++ + LR AR+ A+LVGIRAKR K+
Sbjct: 142 ECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
Query: 728 AAENPD 745
AAE+ D
Sbjct: 202 AAESED 207
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+VRCPT+RYHTK+RAGRGFTL E++ A
Sbjct: 54 LRPVVRCPTIRYHTKLRAGRGFTLEELKGA 83
>AE014134-1746|ABC65888.1| 218|Drosophila melanogaster CG4651-PB,
isoform B protein.
Length = 218
Score = 94.7 bits (225), Expect = 1e-19
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Frame = +1
Query: 136 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKLRP*LHVLQLG--RYVL*C 309
MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR NR+KK + G R V+ C
Sbjct: 1 MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60
Query: 310 DAQLFGTILKYAPVEDSLFVKLGPQIEPSICPNDWNCCRSP*TQQVC*IIANQCSKNKGI 489
+ T L+ A +L G I + + + K
Sbjct: 61 PTIRYHTKLR-AGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119
Query: 490 QSASYTVPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPAPKSVA-RPITEDERTSK 657
+S P +K ++ GE++ EE KLATQL+GP++P++ P V R +T+DE+ K
Sbjct: 120 RSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFK 177
Score = 74.1 bits (174), Expect = 2e-13
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +2
Query: 377 GRRLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL---SRKAKRC*RVRPM 547
G + FA+TIGIAVD RR+NKS+ES Q N+QR+KEYR++LIL + K R
Sbjct: 82 GAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLE 141
Query: 548 KKNVSWLHSYVVH*CQFXXXXXXXXXXXXXKMKELQSLSYLRGARSIAKLVGIRAKRLKD 727
+ ++ V + K+ ++ + LR AR+ A+LVGIRAKR K+
Sbjct: 142 ECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
Query: 728 AAENPD 745
AAE+ D
Sbjct: 202 AAESED 207
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+VRCPT+RYHTK+RAGRGFTL E++ A
Sbjct: 54 LRPVVRCPTIRYHTKLRAGRGFTLEELKGA 83
>AE014134-1745|AAF52842.1| 218|Drosophila melanogaster CG4651-PA,
isoform A protein.
Length = 218
Score = 94.7 bits (225), Expect = 1e-19
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Frame = +1
Query: 136 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKLRP*LHVLQLG--RYVL*C 309
MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR NR+KK + G R V+ C
Sbjct: 1 MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60
Query: 310 DAQLFGTILKYAPVEDSLFVKLGPQIEPSICPNDWNCCRSP*TQQVC*IIANQCSKNKGI 489
+ T L+ A +L G I + + + K
Sbjct: 61 PTIRYHTKLR-AGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119
Query: 490 QSASYTVPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPAPKSVA-RPITEDERTSK 657
+S P +K ++ GE++ EE KLATQL+GP++P++ P V R +T+DE+ K
Sbjct: 120 RSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFK 177
Score = 74.1 bits (174), Expect = 2e-13
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +2
Query: 377 GRRLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLIL---SRKAKRC*RVRPM 547
G + FA+TIGIAVD RR+NKS+ES Q N+QR+KEYR++LIL + K R
Sbjct: 82 GAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLE 141
Query: 548 KKNVSWLHSYVVH*CQFXXXXXXXXXXXXXKMKELQSLSYLRGARSIAKLVGIRAKRLKD 727
+ ++ V + K+ ++ + LR AR+ A+LVGIRAKR K+
Sbjct: 142 ECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
Query: 728 AAENPD 745
AAE+ D
Sbjct: 202 AAESED 207
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +3
Query: 294 LRPIVRCPTVRYHTKVRAGRGFTLREIRAA 383
LRP+VRCPT+RYHTK+RAGRGFTL E++ A
Sbjct: 54 LRPVVRCPTIRYHTKLRAGRGFTLEELKGA 83
>AY118310-1|AAM48339.1| 792|Drosophila melanogaster GH14382p
protein.
Length = 792
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 484 GIQSASYTVPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 612
G+ SA+ T KG+K KGE R+ T GP+ P +P P
Sbjct: 292 GLASANGT--KGEKGEKGEKGMRGRRGGTGATGPIGPPGKPGP 332
>AE014296-1178|AAO41273.1| 778|Drosophila melanogaster CG33171-PC,
isoform C protein.
Length = 778
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 484 GIQSASYTVPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 612
G+ SA+ T KG+K KGE R+ T GP+ P +P P
Sbjct: 292 GLASANGT--KGEKGEKGEKGMRGRRGGTGATGPIGPPGKPGP 332
>AE014296-1177|AAO41274.2| 792|Drosophila melanogaster CG33171-PE,
isoform E protein.
Length = 792
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 484 GIQSASYTVPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 612
G+ SA+ T KG+K KGE R+ T GP+ P +P P
Sbjct: 292 GLASANGT--KGEKGEKGEKGMRGRRGGTGATGPIGPPGKPGP 332
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,377,907
Number of Sequences: 53049
Number of extensions: 635226
Number of successful extensions: 1819
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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