Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00513
(765 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 54 2e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 48 1e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 2e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.005
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 38 0.007
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.009
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.015
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.020
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.036
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.083
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.11
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.11
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.19
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 33 0.33
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.44
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.58
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.3
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.8
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.3
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.3
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.1
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 3.1
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 4.1
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 4.1
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 29 4.1
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.1
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 102 bits (245), Expect = 3e-22
Identities = 53/90 (58%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +1
Query: 238 GLPGWRISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLS 414
GL G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LS
Sbjct: 14 GLSG--AAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLS 71
Query: 415 FWRGNFANVIRYFPTQALNFAFKDKYKQVF 504
FWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 72 FWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +3
Query: 585 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 758
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S GI
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGI 186
Query: 759 I 761
I
Sbjct: 187 I 187
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 355 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 507
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/81 (43%), Positives = 58/81 (71%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
I+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN
Sbjct: 43 IAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGT 96
Query: 436 NVIRYFPTQALNFAFKDKYKQ 498
NVIR FP A+ FA ++YK+
Sbjct: 97 NVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 61.3 bits (142), Expect = 8e-10
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +1
Query: 262 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 441
A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 442 IRYFPTQALNFAFKDKYKQV 501
I+ P + F +K K++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL 220
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/84 (23%), Positives = 45/84 (53%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F
Sbjct: 239 MAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFP 291
Query: 436 NVIRYFPTQALNFAFKDKYKQVFL 507
+++ P ++ A + K +L
Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFYL 315
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 600 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 734
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 597 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 761
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ GII
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGII 297
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 SAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 423
+A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 20 AAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/73 (31%), Positives = 41/73 (56%)
Frame = +1
Query: 259 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 438
SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN +
Sbjct: 68 SAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVS 120
Query: 439 VIRYFPTQALNFA 477
IR FP A+ +A
Sbjct: 121 CIRLFPYSAVQYA 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 259 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 438
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G +
Sbjct: 162 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPS 218
Query: 439 VIRYFP 456
+ FP
Sbjct: 219 FLGLFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 436 NVIRYFPTQALNFAFKDKYKQVF 504
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 758
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +1
Query: 283 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 462
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 463 ALNFA----FKDKYKQVF--LAVLTRRRSSGVTSLVIW 558
A+ F D + +F V T + G +V W
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 355 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 474
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 355 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 498
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 600 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 734
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
Score = 33.9 bits (74), Expect = 0.14
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +3
Query: 663 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 761
++SG+G ++KI++ +GL G ++G G ++ I+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIV 622
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 340 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 504
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 761
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG+ ++ GI+
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 259 SAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 426
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 431 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
IS + A P++ K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158
Query: 436 NVIRYFPTQALNFAFKDK 489
R P L F F ++
Sbjct: 159 YYFRIGPHTVLTFIFLEQ 176
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 358 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLA 510
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLS 85
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +3
Query: 603 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 737
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 734
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 214 LAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVP 270
Query: 436 NVIRYFP 456
+I P
Sbjct: 271 RMIVIAP 277
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF 737
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF 60
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVS 746
TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSIN 173
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 426
+S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGL 408
I+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+
Sbjct: 23 IAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGM 82
Query: 409 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 504
+ ++G + R ++ D+ K ++
Sbjct: 83 KTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 588 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 761
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G +
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSV 110
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 289 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 468
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 469 NFA 477
FA
Sbjct: 116 RFA 118
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 367 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 501
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 737
T+ YPLD R+RLA V + G + CIS K G LY+GF
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGF 126
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 600 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 758
+PLD + RL G++ F+G +C K +++G GLY+G + G+
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGV 98
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 582 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 749
TSLC YP + ARTRL + G++++ + + + +G GLY G G V
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV 999
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 286 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 426
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 618 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 740
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 370 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 495
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 388 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAVLTRRRSSGVTSL 549
+P+E L W G F++VI F A+N AF+++YK++ L ++ R+ TS+
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI-LRIICAGRNMERTSI 324
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 289 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 468
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 469 NFAFKDKYKQV 501
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 591 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 737
C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 ISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 426
+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 148 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRISAAVSKTAVAPIERVKLLLQV 321
AA + T P+ DH + N E R G V L ++ V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 322 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 447
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
I+ +S P++ VK Q + +Y G D +I G+ +F +G A
Sbjct: 366 IAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLA 425
Query: 436 NVIRYFPTQA 465
++R FPT A
Sbjct: 426 TILRGFPTNA 435
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 657 QREFSGLGNCISKIFKSDGLIGLYRGFGVS 746
Q ++G +C+ K+F S+GL G +RG ++
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 585 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 734
S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 666 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 758
++G+ +C +I K + ++GLY+G + G+
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGL 221
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 388 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAVLTRRRSSG 537
+P+E +L W G ++VI F A+N F+D+YK+ +L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKK----LLRRMRRSG 184
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
+S + A P++ +K+ LQ + K +KG +D F++ + +GL ++G +
Sbjct: 29 VSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLS 87
Query: 436 NVIRYFPTQALNF 474
++ P+ AL F
Sbjct: 88 PLLMATPSTALTF 100
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 734
PLD + RL A G+ F G +C K + +GL GLY+G
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 388 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAVLTRRRSSGV 540
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 256 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 435
I+ + + P++RVK +LQ++ + Y G VD RI +E G+ ++G
Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201
Query: 436 NVIRYFP 456
+R P
Sbjct: 202 TAMRDIP 208
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 603 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 746
PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 289 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 468
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 469 NFA 477
F+
Sbjct: 117 LFS 119
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 244 PGWRISAAVSKTAVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 408
P WR + + VA P++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 409 LSFWRGNFANVIRYFP 456
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 271 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 429
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 283 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 456
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 410
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 410
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 410
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 410
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 364 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 501
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 391 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAV 513
P+E L W G ++VI F +N F++++K+++L V
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYLRV 855
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 639 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 517
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 676 RPENSRWPSPLPTSAARRVRAKSRGYTK 593
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 763 VMIPCTDTPKPLYRPIRPSDLKILLMQ 683
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 280 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 459
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 460 QALNF 474
Q L+F
Sbjct: 66 QTLHF 70
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 388 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAVLTRRRSSG 537
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 681 NCISKIFKSDGLIGLYRGFG 740
+C I++ +G+ G YRGFG
Sbjct: 332 DCFRTIYQQEGIFGFYRGFG 351
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 410
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +3
Query: 195 RTKCRTSPIRSRSLRTSWLAYLRRRLQDRRSTHRACQAAAPSTARQQADRRRPALQ 362
RT+ R + R R + RRR DRR T A T R+Q DRRR Q
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQ 164
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 28.3 bits (60), Expect = 7.2
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 115 ELVFRDPPSA----CAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGWRISAAVSKTA 282
E + RDP + A+P S I EQNVE S + G+ G + T
Sbjct: 269 EALTRDPKESDTNVSRASPDSHLQTVISEIREQNVELVESSPIEAGVDGETPAPDEKSTD 328
Query: 283 VAPIERVKLLLQVQHVSK-QIA 345
VAPI V LQ + ++ QIA
Sbjct: 329 VAPISEVADALQEKEENEPQIA 350
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 37 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 180
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,030
Number of Sequences: 59808
Number of extensions: 482765
Number of successful extensions: 1639
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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