Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00512
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.004
UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    42   0.011
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    35   2.3  
UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep: ...    33   9.2  
UniRef50_Q54VR3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 528 M*KFKILICSIIKILHDLSSNRCEPGWFLS 617
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = +2

Query: 422 LIKRKNYLRDNSVIFFFSSNKKKSLRPRCGLR 517
           +I R +YLRDNSVIFF +S +++ LRPRC ++
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIK 32



 Score = 37.1 bits (82), Expect = 0.43
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = +1

Query: 508 WIKIKFKCRSLKF*SVRSLKSYMI 579
           WIKI  +CRSL + SVR LKSYMI
Sbjct: 30  WIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 537 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRK 647
           +KI    IIK+++ L  N CE G+  SFN YN + ++
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKR 313


>UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep:
           ORFC - Leptospira interrogans serovar
           Icterohaemorrhagiae
          Length = 85

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +2

Query: 380 LIVYINK*LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRC 508
           + VY NK L D  ++++   + + N + F FS N++++ + RC
Sbjct: 5   ICVYYNKLLYDQKVILRLLEFYKSNYIPFLFSENQRRTRQLRC 47


>UniRef50_Q54VR3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 552

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 47  LLSKTCLFVNNLKSNL-PTDIFIKGLQYFDCTKVA*SLVF*LVTCMKDWMKYKLSLL*KK 223
           ++   C  +NN    + P+D FI    Y D       L+F +    KDW+K   + L   
Sbjct: 17  IIKLLCRHINNNNKLIEPSDFFI---DYRDNEDEIKRLIFSIALVSKDWLKSLSNYLNVA 73

Query: 224 IEFNFLIKK 250
           ++FNFL K+
Sbjct: 74  VDFNFLEKE 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,353,999
Number of Sequences: 1657284
Number of extensions: 8065424
Number of successful extensions: 13240
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13239
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)