Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00509
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein. 82 2e-15
D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1 p... 82 2e-15
BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein. 82 2e-15
BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for IM... 82 2e-15
AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1... 82 2e-15
BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein. 58 3e-08
M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein. 31 4.5
AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform... 31 4.5
AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein. 31 4.5
AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta, non-ery... 31 4.5
>U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein.
Length = 399
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 12 TSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIE 182
+ EE AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR
Sbjct: 18 SKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRES 77
Query: 183 VTHYLHRMLLHKLFHRAKKV 242
V Y +R+L + FHRA KV
Sbjct: 78 VVDYCNRLLKKQFFHRALKV 97
Score = 77.4 bits (182), Expect = 5e-14
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 588 AAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRGP 764
A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+GP
Sbjct: 231 AGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKGP 289
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 404 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILV 508
+LE H +QVFLD + YVWIYDP + +V G+++
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLIL 203
Score = 39.5 bits (88), Expect = 0.013
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 508 LFGTITVCMFPLWPATVRIGVYYLSI 585
+ I +FPLWPA +R+GVYYLS+
Sbjct: 204 VIAVIAATLFPLWPAEMRVGVYYLSV 229
>D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1
protein.
Length = 399
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 12 TSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIE 182
+ EE AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR
Sbjct: 18 SKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRES 77
Query: 183 VTHYLHRMLLHKLFHRAKKV 242
V Y +R+L + FHRA KV
Sbjct: 78 VVDYCNRLLKKQFFHRALKV 97
Score = 77.4 bits (182), Expect = 5e-14
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 588 AAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRGP 764
A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+GP
Sbjct: 231 AGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKGP 289
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 404 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILV 508
+LE H +QVFLD + YVWIYDP + +V G+++
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLIL 203
Score = 39.5 bits (88), Expect = 0.013
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 508 LFGTITVCMFPLWPATVRIGVYYLSI 585
+ I +FPLWPA +R+GVYYLS+
Sbjct: 204 VIAVIAATLFPLWPAEMRVGVYYLSV 229
>BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein.
Length = 399
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 12 TSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIE 182
+ EE AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR
Sbjct: 18 SKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRES 77
Query: 183 VTHYLHRMLLHKLFHRAKKV 242
V Y +R+L + FHRA KV
Sbjct: 78 VVDYCNRLLKKQFFHRALKV 97
Score = 77.4 bits (182), Expect = 5e-14
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 588 AAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRGP 764
A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+GP
Sbjct: 231 AGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKGP 289
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 404 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILV 508
+LE H +QVFLD + YVWIYDP + +V G+++
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLIL 203
Score = 39.5 bits (88), Expect = 0.013
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 508 LFGTITVCMFPLWPATVRIGVYYLSI 585
+ I +FPLWPA +R+GVYYLS+
Sbjct: 204 VIAVIAATLFPLWPAEMRVGVYYLSV 229
>BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for
IMAGE:3932691) protein.
Length = 169
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 12 TSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIE 182
+ EE AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR
Sbjct: 18 SKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRES 77
Query: 183 VTHYLHRMLLHKLFHRAKKV 242
V Y +R+L + FHRA KV
Sbjct: 78 VVDYCNRLLKKQFFHRALKV 97
>AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1
protein.
Length = 399
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +3
Query: 12 TSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIE 182
+ EE AVAK+L+ N PTK T + H V+YF +KAVD LL SKWA G+ FTTR
Sbjct: 18 SKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRES 77
Query: 183 VTHYLHRMLLHKLFHRAKKV 242
V Y +R+L + FHRA KV
Sbjct: 78 VVDYCNRLLKKQFFHRALKV 97
Score = 77.4 bits (182), Expect = 5e-14
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 588 AAAFLVMIIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRGP 764
A F+ I+ L V R ++F ++W++T RHH W LPNLT DVGF SF PLY +EY+GP
Sbjct: 231 AGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADVGFIDSFRPLYTHEYKGP 289
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 404 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILV 508
+LE H +QVFLD + YVWIYDP + +V G+++
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLIL 203
Score = 39.5 bits (88), Expect = 0.013
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 508 LFGTITVCMFPLWPATVRIGVYYLSI 585
+ I +FPLWPA +R+GVYYLS+
Sbjct: 204 VIAVIAATLFPLWPAEMRVGVYYLSV 229
>BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein.
Length = 104
Score = 58.4 bits (135), Expect = 3e-08
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 78 LNHHVEYFTGTKAVDALLTSKWA---TGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 242
+ H V+YF +KAVD LL SKWA G+ FTTR V Y +R+L + FHRA KV
Sbjct: 2 MGHRVDYFIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 59
>M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.
Length = 2364
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 51 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 215
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1749 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1808
Query: 216 KLFHRAKKV 242
K +H AK++
Sbjct: 1809 KFYHDAKEI 1817
>AF327441-1|AAO15362.1| 2155|Homo sapiens beta-spectrin 2 isoform 2
protein.
Length = 2155
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 51 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 215
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1736 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1795
Query: 216 KLFHRAKKV 242
K +H AK++
Sbjct: 1796 KFYHDAKEI 1804
>AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.
Length = 2314
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 51 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 215
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1699 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1758
Query: 216 KLFHRAKKV 242
K +H AK++
Sbjct: 1759 KFYHDAKEI 1767
>AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta,
non-erythrocytic 1 isoform 1 variant protein.
Length = 2377
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 51 NVPTKKTKFLNHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRML-----LH 215
N+ ++ +NH + + DA ++W G N A+ +E+ ++L LH
Sbjct: 1762 NIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH 1821
Query: 216 KLFHRAKKV 242
K +H AK++
Sbjct: 1822 KFYHDAKEI 1830
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,584,660
Number of Sequences: 237096
Number of extensions: 2213447
Number of successful extensions: 5677
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5671
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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