Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00509
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical p...    64   1e-10
Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    29   4.8  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     29   4.8  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine re...    28   6.3  
Z78415-9|CAI58633.1|  685|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AY912076-1|AAX81408.1|  685|Caenorhabditis elegans extracellular...    28   8.4  

>Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical
           protein C18E9.2a protein.
          Length = 364

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +3

Query: 6   RATSEEYAVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALLTSKWA--TGKNPAFTTRI 179
           + T E+  +AK+++ N PT  T F  + V YF+G KAVD L  SK+     K+  F TR 
Sbjct: 16  KMTKEQEDIAKYIRFNCPTATTMFEGNEVHYFSGNKAVDTLWESKYGNKAKKDAMFKTRD 75

Query: 180 EVTHYLHRMLLHKLFHRAKKVPVSEKN*K 266
           +  HY+  +   +LF RAKK+   +K  K
Sbjct: 76  DCFHYICELNSKQLFFRAKKLVAKKKENK 104



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +3

Query: 609 IIGLTVLRVVVFCLVWILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYRG 761
           II   +LR ++F +++ +T  +H LW+LPNLTED G   SF P Y YEY G
Sbjct: 230 IIVTAILRTILFGIIYAVTFGKHKLWVLPNLTEDCGVLESFQPWYTYEYVG 280



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +1

Query: 508 LFGTITVCMFPLWPATVRIGVYYLSI 585
           L GTI  C+FPLWP  +R GVYY+SI
Sbjct: 196 LVGTIVGCLFPLWPVWLRQGVYYVSI 221



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 401 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVSLG 517
           ++L +H  Q F+D  D YVW++DP P    + G+L+ +G
Sbjct: 160 VKLLVHEVQAFVDDKDVYVWVFDPTPLMKKIIGVLMLVG 198


>Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical
           protein T07G12.11 protein.
          Length = 575

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 630 GARSALLSSRGKPPRYAQVIYSYSNSGRPEWEHANRDRP 514
           GA S+++ + GKP RY +   S  N+   + E+ ++D P
Sbjct: 530 GAHSSIIGNIGKPRRYKKCKNSLKNTPEVDNENVDKDSP 568


>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 39  WLKANVPTKKTKFL--NHHVEYFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLL 212
           WLK    +KKTKFL  N +  YFT +K       S     K P F+ +I+ T    R  L
Sbjct: 298 WLKMLQKSKKTKFLQKNGNFTYFT-SKNSQIYRFSAQIPPKIPNFSFQIDQTKLTRRQRL 356

Query: 213 HKLFHRA 233
             + + A
Sbjct: 357 TLMLNNA 363


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
           protein F36H2.3 protein.
          Length = 1388

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 439 YGRCLRLDLRPEALVLLGLWDSG 507
           +GR    DL+PE LV++G+W  G
Sbjct: 19  FGRKCDADLKPEKLVVVGVWKRG 41


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5410 CVTFECEISGSPRPEYRWFKGCKELVD 5436


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5939 CVTFECEISGSPRPEYRWFKGCKELVD 5965


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5620 CVTFECEISGSPRPEYRWFKGCKELVD 5646


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5410 CVTFECEISGSPRPEYRWFKGCKELVD 5436


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5939 CVTFECEISGSPRPEYRWFKGCKELVD 5965


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 5620 CVTFECEISGSPRPEYRWFKGCKELVD 5646


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 53   CTNEEDKISKSPRGIFHRYKGCRCLVD 133
            C   E +IS SPR  +  +KGC+ LVD
Sbjct: 4829 CVTFECEISGSPRPEYRWFKGCKELVD 4855


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 671 GQRQDPD*TEDDHAEHGQPYYHHEESR 591
           G R  P      H  HG P++HH + R
Sbjct: 382 GGRHGPPHCPGRHGHHGPPHHHHHDGR 408


>AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 60 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 642 FCLVW-ILTLSRHHLWLLPNLTEDVGFFASFWPLYHYEYR 758
           F + W    L    ++L+  +T D   FASF+P+Y+++YR
Sbjct: 82  FFIAWPTFNLGSFRVFLVFFMTSD-RVFASFFPIYYHKYR 120


>Z78415-9|CAI58633.1|  685|Caenorhabditis elegans Hypothetical
           protein C17G1.6b protein.
          Length = 685

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 600 GKPPRYAQVIYSYSNSGRPEWEHANRDRPKETRIPQTQ*YQGFG 469
           G P   A V  +Y+ + RP W    R  P  T  P T  +  +G
Sbjct: 460 GTPITPATVRPTYATTTRPYWTRTTRPTPTTTVAPDTASWSAWG 503


>AY912076-1|AAX81408.1|  685|Caenorhabditis elegans extracellular
           matrix metalloproteaseprotein.
          Length = 685

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 600 GKPPRYAQVIYSYSNSGRPEWEHANRDRPKETRIPQTQ*YQGFG 469
           G P   A V  +Y+ + RP W    R  P  T  P T  +  +G
Sbjct: 460 GTPITPATVRPTYATTTRPYWTRTTRPTPTTTVAPDTASWSAWG 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,171
Number of Sequences: 27780
Number of extensions: 316287
Number of successful extensions: 1081
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)