Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00508
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 162 3e-40
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 162 3e-40
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 157 1e-38
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 155 4e-38
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 154 5e-38
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 154 7e-38
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 149 2e-36
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 148 4e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 147 8e-36
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 144 7e-35
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 131 4e-31
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 131 4e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 125 3e-29
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 120 8e-28
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 110 1e-24
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 109 1e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 105 4e-23
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 91 9e-19
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 87 1e-17
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 87 2e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 80 1e-15
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 76 3e-14
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 63 2e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 44 8e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 36 0.028
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.065
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 34 0.11
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 34 0.11
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 34 0.11
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.61
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 30 1.4
At3g51360.1 68416.m05624 aspartyl protease family protein contai... 29 4.3
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.5
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 7.5
At4g03030.1 68417.m00411 kelch repeat-containing F-box family pr... 27 9.9
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 9.9
At3g17230.1 68416.m02201 invertase/pectin methylesterase inhibit... 27 9.9
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.9
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.9
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.9
At1g63470.1 68414.m07177 DNA-binding family protein contains a A... 27 9.9
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.9
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 162 bits (393), Expect = 3e-40
Identities = 74/109 (67%), Positives = 85/109 (77%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRPLR 534
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE +S G+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 7/72 (9%)
Frame = +2
Query: 74 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 232
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 233 HRVIPNFSCKEG 268
HRVIPNF C+ G
Sbjct: 61 HRVIPNFMCQGG 72
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 510 SQSGKTSKRIVIKDCGQIA 566
S SGK +K +V+ DCGQ++
Sbjct: 154 SSSGKPTKPVVVADCGQLS 172
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 162 bits (393), Expect = 3e-40
Identities = 74/109 (67%), Positives = 84/109 (77%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRPLR 534
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE +S G+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 7/71 (9%)
Frame = +2
Query: 77 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 235
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 236 RVIPNFSCKEG 268
RVIPNF C+ G
Sbjct: 63 RVIPNFMCQGG 73
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 510 SQSGKTSKRIVIKDCGQIA 566
S SGK +K +VI DCG+I+
Sbjct: 155 SSSGKPTKPVVIADCGEIS 173
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 157 bits (380), Expect = 1e-38
Identities = 73/107 (68%), Positives = 81/107 (75%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F +QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 244
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 245 PNFSCKEG 268
P+F + G
Sbjct: 93 PSFMIQGG 100
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 155 bits (375), Expect = 4e-38
Identities = 73/107 (68%), Positives = 79/107 (73%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F LQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 244
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 245 PNFSCKEG 268
P+F + G
Sbjct: 96 PSFMLQGG 103
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 154 bits (374), Expect = 5e-38
Identities = 71/106 (66%), Positives = 82/106 (77%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P+F QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGR 525
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE + GR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 7/69 (10%)
Frame = +2
Query: 83 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 241
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 242 IPNFSCKEG 268
IP F C+ G
Sbjct: 65 IPKFMCQGG 73
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 510 SQSGKTSKRIVIKDCGQIA 566
S SG+TSK +VI DCGQI+
Sbjct: 155 SDSGRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 154 bits (373), Expect = 7e-38
Identities = 70/107 (65%), Positives = 81/107 (75%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E + +G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Frame = +2
Query: 74 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 232
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 233 HRVIPNFSCKEG 268
HR+IP F C+ G
Sbjct: 61 HRIIPGFMCQGG 72
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 501 DLCSQSGKTSKRIVIKDCGQI 563
D+ S G S+R+VI+DCG++
Sbjct: 151 DVGSDMGNPSERVVIEDCGEL 171
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 149 bits (361), Expect = 2e-36
Identities = 67/96 (69%), Positives = 78/96 (81%)
Frame = +1
Query: 217 QGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 396
+G F F +QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 397 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 504
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKE 265
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +F +
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 266 G 268
G
Sbjct: 156 G 156
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 148 bits (358), Expect = 4e-36
Identities = 69/107 (64%), Positives = 79/107 (73%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F +QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 244
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 245 PNFSCKEG 268
P F + G
Sbjct: 120 PGFMIQGG 127
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 147 bits (356), Expect = 8e-36
Identities = 68/97 (70%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 250 FQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 429
F +QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 430 SWLDGRHVVFGNVVEGMEVVKQIETFAASLG-RPLRE 537
SWLDGRHVVFG V+EGMEVVK IE G RP ++
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 253
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 254 SCKEG 268
+ G
Sbjct: 150 MIQGG 154
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 144 bits (348), Expect = 7e-35
Identities = 67/106 (63%), Positives = 79/106 (74%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F P F QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGR 525
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE + G+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 91.1 bits (216), Expect = 7e-19
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 7/72 (9%)
Frame = +2
Query: 74 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 232
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 233 HRVIPNFSCKEG 268
HRVIP F C+ G
Sbjct: 61 HRVIPGFMCQGG 72
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 510 SQSGKTSKRIVIKDCGQIA 566
S SGKTSK + I DCGQ++
Sbjct: 154 SDSGKTSKVVTITDCGQLS 172
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 131 bits (317), Expect = 4e-31
Identities = 63/107 (58%), Positives = 73/107 (68%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 74.1 bits (174), Expect = 9e-14
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Frame = +2
Query: 71 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 226
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 227 IFHRVIPNFSCKEG 268
FHRVI F + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 131 bits (317), Expect = 4e-31
Identities = 63/107 (58%), Positives = 73/107 (68%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F F QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 74.1 bits (174), Expect = 9e-14
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Frame = +2
Query: 71 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 226
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 227 IFHRVIPNFSCKEG 268
FHRVI F + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 125 bits (302), Expect = 3e-29
Identities = 59/98 (60%), Positives = 73/98 (74%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F F +QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 501
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +2
Query: 74 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 229
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 230 FHRVIPNFSCKEG 268
FHRVI F + G
Sbjct: 61 FHRVIKGFMIQGG 73
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 120 bits (290), Expect = 8e-28
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 FQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 429
F +Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 430 SWLDGRHVVFGNVV-EGMEVVKQIETFA 510
WLD +HVVFG V+ +G+ V+++IE A
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIENVA 180
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = +2
Query: 83 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 247
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 248 NFSCKEG 268
+F + G
Sbjct: 92 DFMVQSG 98
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 110 bits (264), Expect = 1e-24
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F F +QGGD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASL-GRPLRE 537
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE A + G+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 244
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 245 PNFSCKEG 268
F + G
Sbjct: 108 SGFVIQGG 115
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 109 bits (263), Expect = 1e-24
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = +1
Query: 250 FQLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 426
F +QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 427 TSWLDGRHVVFGNVVEGMEVVKQIETFAA-SLGRPLRE 537
LDG+H +FG V GMEV+K++ + + RP+ E
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 98 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSP 277
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F +G P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDF-IVQGGDP 65
Query: 278 TITALG 295
T T G
Sbjct: 66 TGTGRG 71
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 105 bits (251), Expect = 4e-23
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 250 FQLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 426
F +Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 427 TSWLDGRHVVFGNVVEGMEVVKQIE 501
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 122 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEG 268
LG I ++L + PKT ENF C G+ Y +FHRVI F + G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTG 529
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 90.6 bits (215), Expect = 9e-19
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Frame = +1
Query: 250 FQLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 426
F +QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 427 TSWLDGRHVVFGNVVEGMEVVKQIETFAASLG-RPLRE 537
L+G + +FG V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +2
Query: 122 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITALG 295
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I F +G P T G
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCA--SGY-YDGTIFHRNIKGFMI-QGGDPKGTGKG 62
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/107 (42%), Positives = 59/107 (55%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 387
L +G F Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A
Sbjct: 57 LHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADR 116
Query: 388 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAASLGRP 528
D GS F IT LD +VVFG +++G E++K+IE G+P
Sbjct: 117 DKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = +2
Query: 71 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 226
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 227 IFHRVIPNFSCKEG 268
FHR++ S + G
Sbjct: 63 FFHRIMKGSSAQAG 76
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 86.6 bits (205), Expect = 2e-17
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 202 ERLRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 378
ER G+ F F +QGGD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 379 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFAA-SLGRPLRE 537
+G TNGSQFF+ + L+ +H VFG VV G+ + +E RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +2
Query: 125 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITALG 295
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NF +G PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMI-QGGDPTGTGKG 405
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
Frame = +2
Query: 74 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 232
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 233 HRVIPN 250
++P+
Sbjct: 61 DHIVPD 66
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +1
Query: 208 LRLQGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 384
+ +G F P GGD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 385 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 501
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +1
Query: 244 PQFQLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 417
P F +QGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 418 TVKTSWLDGRHVVFGNV 468
K WLD +H +FG V
Sbjct: 118 LDKCDWLDKKHTIFGKV 134
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 125 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITALG 295
G I +EL PK+ NF LC +G+ + +IFHRVIP F +G PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGF-LVQGGDPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 62.9 bits (146), Expect = 2e-10
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Frame = +1
Query: 184 CPVHWRERLRL------QGLHFPSCHPQFQLQGGDFTNHNGTGGKSIY----GNK---FE 324
CP+ + L+L G F + F Q GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 325 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 498
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 499 -ETFAASLGRPLR 534
E + RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +2
Query: 122 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITALG 295
LG IVI+L SD P TC+NF LC K Y G +FH V +F+ + G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 86 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 253
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P +
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGY 148
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 394 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 498
NG++F IT V + L+ +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 113 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITAL 292
D G + IEL D P + F C + G+ +KG +F RV+ +F + G S A+
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +1
Query: 217 QGLHFPSCHPQFQLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 396
+G F F +Q GD + ++ + +LKH ++ A +
Sbjct: 115 KGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQG 170
Query: 397 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 501
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 171 GFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 110 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 247
D PLG++V+ L P T F+ +CT YK + H++ P
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFP 125
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 388 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 504
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 125 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPT 280
G I +EL + +P+ + F LC + +KG F RVI N+ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 403 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 501
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 125 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPT 280
G I +EL + +P+ + F LC + +KG F RVI N+ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 403 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 501
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 125 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPT 280
G I +EL + +P+ + F LC + +KG F RVI N+ + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 403 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 501
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -2
Query: 500 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 321
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 164 KTCENFRALCTGEKGFGYKGSIFHRVIPNFSCKEGTSPTITALGESPS-TAISLKTR 331
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At3g51360.1 68416.m05624 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 488
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 441 IQPGGLDSGDEELGTISISTGISHGEDARSSV--LKGEILVFKLIAVDGLSPSAVMVGEV 268
+ PG +G I +ST DAR + + ++ +FK +AV+G+ A+ V
Sbjct: 178 LSPGSKSTGVLVEDVIHMSTEEGEARDARITFGCSESQLGLFKEVAVNGIMGLAIADIAV 237
Query: 267 PSLQLKLGM 241
P++ +K G+
Sbjct: 238 PNMLVKAGV 246
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 57 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 182
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 435
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 436 LDGRHVVFGNVVEGMEVVKQIE 501
+VF N + EVV++++
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQ 596
>At4g03030.1 68417.m00411 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 442
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 321 KLIAVDGLSPSAVMVGEVPSLQLKLGMTRWKMEPL*PK 208
K++AVD P M+ + L+ ++G+ RW+ E PK
Sbjct: 325 KIVAVDCGKPVFFMLDKDWILRYEMGLNRWRKESSVPK 362
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 468 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 340
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g17230.1 68416.m02201 invertase/pectin methylesterase inhibitor
family protein similar to SP|P83326 Pectinesterase
inhibitor (Pectin methylesterase inhibitor) (PMEI)
{Actinidia chinensis}; contains Pfam profile PF04043:
Plant invertase/pectin methylesterase inhibitor
Length = 351
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -2
Query: 566 GNLTTVFDNDSLRGLPRLAAKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVS 387
G L +VF L G LAA TT+ P+ P TC+ + EV ++ + V+
Sbjct: 235 GLLDSVFQKTQLLGYKSLAAMKGSVNTTTDPALKIPFETCV-TDYEVAIKAIEEAQGFVT 293
Query: 386 APA 378
+ A
Sbjct: 294 SKA 296
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 416 VMKNWEPLVSAPALAMERTPGPVCLR 339
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 416 VMKNWEPLVSAPALAMERTPGPVCLR 339
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -2
Query: 461 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 294
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g63470.1 68414.m07177 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 378
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 217 QGLHFPSCHPQFQLQGGDFTN 279
+ + FP H QF LQ G FTN
Sbjct: 5 EAMAFPGSHSQFYLQRGVFTN 25
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 416 VMKNWEPLVSAPALAMERTPGPVCLR 339
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,244,728
Number of Sequences: 28952
Number of extensions: 395490
Number of successful extensions: 1168
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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