Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00505
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.59 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 363 DLSMKTGNLTVNALQVTNKLSELNYAFTRIIEAMVLFVSISI 238
           D+ ++ G LT+N +Q TN+   L  A   I   +   + IS+
Sbjct: 752 DIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISV 793


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 296 NSLSLFVTWRALTVRLPVFILKSEATTCPLCPSVL 400
           N  S  + W AL  +  VFI K       +CPS+L
Sbjct: 218 NQCSGTIDW-ALPNKRTVFIRKGGTAKASMCPSLL 251



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 626 YRSSWTARNRRHRKNGKHIQVPKRIQ 549
           Y S+      R   +GK++  P+RIQ
Sbjct: 95  YTSAQLVELEREFHHGKYLSRPRRIQ 120


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +2

Query: 470 QKAD--CEISRISVYLKRLIMRRNRYKLIVFALVLVYVYHFFGVGDYVQSKNFDSDFNYP 643
           +KAD  C+  ++  Y  +LI   +R       L ++ + HFF V   +QS++  +D  +P
Sbjct: 311 KKADSFCK-KKLENYSLQLI--NHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFP 367

Query: 644 L 646
           +
Sbjct: 368 V 368


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 563 PKRIQSIYICFSSLSVFLSTLRFAIF 486
           PK   + Y+C S LS  LS     +F
Sbjct: 569 PKNCAAYYVCRSGLSYHLSCAENMMF 594


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +1

Query: 244 NGDKKHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYL 378
           N  ++HH  N S E +         L       A LH    SH+L
Sbjct: 312 NMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHHL 356


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 247 GDKKHHGFNNSREGIVQFTQLIRDLESIDGEVARLHTQIRSHYL 378
           GD+ H G  NS   IVQ+ Q  +     +G+  +L    ++  L
Sbjct: 364 GDEVHLGCWNSTPSIVQWMQDQKGWGRSEGDFIKLWDMFQNESL 407


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 625 IEVLGLHVIADTEKMVNIYKYQSEYNQFISVSPHYQSF 512
           + + G H    T    N Y Y S+      + PHY ++
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 509 LKRLIMRRNRYKLIVFALVLVYV 577
           LK   +R+N Y L++F + ++YV
Sbjct: 90  LKGRKIRKNLYYLLLFVINVLYV 112


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 625 IEVLGLHVIADTEKMVNIYKYQSEYNQFISVSPHYQSF 512
           + + G H    T    N Y Y S+      + PHY ++
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 625 IEVLGLHVIADTEKMVNIYKYQSEYNQFISVSPHYQSF 512
           + + G H    T    N Y Y S+      + PHY ++
Sbjct: 5   VGMYGHHSQHGTYPSDNYYNYTSDIPNAQQMPPHYSNY 42


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 347 VFILKSEATTCPLCPSVLLLTH 412
           V I + +  TCP CP +    H
Sbjct: 223 VHIREDKRLTCPKCPFITEYKH 244


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 626 YRSSWTARNRRHRKNGKHIQVPKRIQ 549
           Y S+      R   +GK++  P+RIQ
Sbjct: 86  YTSAQLVELEREFHHGKYLSRPRRIQ 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,846
Number of Sequences: 336
Number of extensions: 3488
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)